Glycocaulis alkaliphilus: X907_2720 Help Entry X907_2720         CDS       T05786                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism gak  Glycocaulis alkaliphilus Pathway gak02020   Two-component system gak02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:gak00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     X907_2720  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     X907_2720  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:gak03021]     X907_2720 Transcription machinery [BR:gak03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      X907_2720 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_36 Sigma70_r4_2 DUF4741 HTH_AraC Rv2175c_wHTH Auxin_canalis PCI HTH_12 LacI Motif Other DBs NCBI-ProteinID:  AZU05230 UniProt:  A0A3T0ED69 LinkDB All DBs Position complement(2834967..2836466) Genome browser AA seq 499 aa AA seqDB search MAKLGQRLEARQGQGLVMTPQLQQAIKLLQLNNMELAEFVEEELERNPLLERDERPEPGG EEERTPAGEAADPHGELSFDAPSSAADDAFDADREAMYADSAPDMAGARDTGGAVDWSRA GKGGGGFDGEDYDAAAHASREKTLREHLHDQLADLALTSADRMIAAHLIDLADDDGYMRA DLAETAERLGVTVSEVEALLARLQEFEPAGVMARGLQECLAIQLAERNRLDPAMAALVDN LPLLAKHDYAGLRGLCEVDQEDLEDMIAELKRLTPKPGLAFGSDSTRAVEPDVYVRERPD GSWAVELNTDTLPRVLMNNRYAAQIAGSARSAEEKTFITECTQNASWLVKSLDQRARTIL KVASEIVRQQDLFLAKGVAWLRPLNLKTVADAVGMHESTVSRVTSNKYVSTPRGLFELKY FFTSSIASADGGEAYSAEAVRYRIKTMIQSETVDDVMSDDAIVDRLLSDGIEIARRTVAK YREAMNIPSSVQRRRMMKR NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt atggcaaagctcggacaaaggctggaggcaaggcaggggcagggtctggtaatgaccccg cagctccagcaggccatcaagctgctgcagctgaacaatatggaacttgccgagttcgtc gaggaagagctggagcgcaacccgctgctggagcgtgacgagcgcccggagcccggcggt gaagaggagcgcacccctgccggggaggccgcagatccgcatggcgagctcagctttgac gccccgtcctctgccgccgacgatgccttcgatgctgatcgcgaggcgatgtatgccgac agcgcgcccgacatggcaggcgcgcgcgataccggcggagcggtggactggtcgcgtgcc ggaaagggcgggggcggtttcgatggcgaggattatgatgctgcggcccatgccagccgg gaaaagaccctgcgtgagcatctgcatgaccagctggccgatctggcgctgacgagcgct gaccgcatgatcgcggcccacctgatcgatctggccgatgatgatggctatatgcgcgca gaccttgcggagacggcagagcgtctcggcgtcaccgtgtccgaggttgaggccctgctg gcgcgtctgcaggagtttgaaccggcgggtgtcatggcgcgcggcctgcaggaatgcctg gcgatacagctggccgaacgcaaccggctggacccggccatggcggcgctggtggataac ctgcccttgctggccaagcatgattatgcgggcctgcggggcctttgcgaggtcgatcag gaagaccttgaagacatgatcgccgagctgaaacggctcacccccaagccgggcctcgct tttggttctgacagcacccgggcggtcgagccggacgtctatgtgcgtgagcggccggac ggcagctgggcggtcgagctcaataccgacaccctgccgcgcgtgctgatgaataaccga tatgccgcgcagattgccggcagtgcgcgctcggcggaggaaaagaccttcatcaccgaa tgcacacagaacgcgtcatggctggtcaaaagcctcgatcagcgtgcgcgcaccatcctg aaagtcgccagcgagattgtccgccagcaggacctgtttctggccaagggcgtggcctgg ctgcgtccgctgaacctgaagacggtcgccgatgcggtcggcatgcacgagagcacggtc agccgggtcacctccaataaatatgtgtcgacgccgcgcggcctgttcgagctgaaatat ttcttcacctcctccatcgcgtctgccgatggcggcgaggcctattcggccgaggctgta cgctaccgcatcaagaccatgatccagtccgaaacggtggacgatgtgatgagcgatgac gccattgttgaccgtctgctatctgacgggatcgagattgcccggcgcaccgtggcaaaa taccgcgaggcgatgaacattccctcatcggtgcagcgccgccggatgatgaagcgatag

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