Glycocaulis alkaliphilus: X907_2724
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Entry
X907_2724 CDS
T05786
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gak
Glycocaulis alkaliphilus
Brite
KEGG Orthology (KO) [BR:
gak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gak03016
]
X907_2724
Enzymes [BR:
gak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
X907_2724
Transfer RNA biogenesis [BR:
gak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
X907_2724
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZU05234
UniProt:
A0A3T0ED71
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All DBs
Position
complement(2838741..2839355)
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AA seq
204 aa
AA seq
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MTIHFHKADLPAGLDLGKRVAIDTETLGLSLVRDPLCLVQLSAGDGDAHIVQLDRSSYDC
PNLKALLADEGVEKILHFARFDVAMIARDLGVTLRPVFCTKIASKLARTYTDRHGLKDVA
REIAGVELSKQQQSSDWGAGEISEAQLKYAADDVLYLHQIRDGLEAMLIREGRMEMAKAC
FSFLPTRAALDLAGWADADIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccatttccacaaggccgacctgcccgccgggctggatcttggaaaacgcgtt
gcaatcgataccgagacgcttggcctgtcgctggtgcgcgatccgctatgcctggtccag
ttgtcggcaggcgacggggacgcacatatcgtccagctggaccgttcctcctatgactgc
ccgaatctgaaagcgctgctggccgatgaaggcgtagagaaaattctccattttgcgcgc
tttgatgtggcgatgattgcgcgtgatctgggtgttacgctgcggcctgtattctgcacc
aagatcgcttccaagctggcgcggacctataccgaccggcacggtctgaaggacgtggca
cgcgagatcgcgggggtggagctttccaaacagcagcaaagctctgactggggcgcaggc
gaaatcagcgaagcgcagcttaaatacgccgctgatgacgttctctatctgcatcagatc
cgcgacgggctggaagccatgctgatccgcgaggggcggatggagatggcaaaggcgtgc
ttcagcttcctgccaacccgggcggcgctggatctggccggctgggcggacgccgacatt
ttcgctcacagctag
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