Gluconobacter albidus: A0U94_02735
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Entry
A0U94_02735 CDS
T04736
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gal
Gluconobacter albidus
Pathway
gal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U94_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gal03019
]
A0U94_02735
03009 Ribosome biogenesis [BR:
gal03009
]
A0U94_02735
Enzymes [BR:
gal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A0U94_02735
Messenger RNA biogenesis [BR:
gal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A0U94_02735
Ribosome biogenesis [BR:
gal03009
]
Prokaryotic type
rRNA processing factors
A0U94_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AQS90056
LinkDB
All DBs
Position
complement(633296..636136)
Genome browser
AA seq
946 aa
AA seq
DB search
MTKRMLIDTTHAEETRVVVMDGDRVEDYDVETSTKKQLKGNIYLAKVIRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYFQIPVADREKLIALQEEEIAERGDAADDAETETVSEDGADNE
DGDNHDRRAPETVGGEHDTGEESASSRRTARFLRNYKIQEVIRRRQVLLVQVVKEERGNK
GAALTTYISLAGRYCVLMPNALRGGGVSRKITSDADRRRLRDVIAELDLPKSMAMIVRTA
GAGRPAQEVTRDCEYLLQLWDDIRSHALSSVAPTLVYEEASLIKRVIRDLFSKDIEDILV
DGEAAWKNAREFMRLLMPSNANKVKLWQNRGQSLFARYNVEGHLDAMFSPTARLPSGGYL
VINQTEALVAIDVNSGKSTSQRNIEETALRTNLEAAEEVGRQLRLRDLAGLVVIDFIDME
SRRHNAQVEKRLKEALRSDRARIQVGHISHFGLLEMSRQRLRPSIAESVLTPCPHCQGTG
FIRGTESSALHVLRAIDEEGARQRSAEIEVYVGSEIALYILNHKRSWLADIERHHRMQVI
FRTEENLAAADMRIERLKTQTAAPAQARAPERTERAVERAPESVRTIEIIEEQAPVALRV
ETPVVDAEVIEDVVPSEGQEDSNDGRRRRRRRRRGGRREQNGDVAADAPQDHNVHAPEER
ETPASDTADENGIIPGRRRTRFKRIVKEAEGSEAPRAEPMAETRDVAPRRPAPTPRPAAP
APAARNPRRREEREERPAQHRYTGPTPADPFGGSFDIFDVIEQAEFEGTTQALQTGISLP
TDVVIEHVPAVETAVAVEERAAEVPATEEAPKPRRGRGRRPARAKAADAAPAETVTEAAP
VVEVAPAPAVEEPVAEEAPKPRRTRTRRTPKAEAVATEAPAEAAPEAAPAPAEVAAEETA
KPKRSRTRRAPKTAAAEAPAEDGNILQPVNIDEVAPAKRRAGWWKR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcgtatgctcatcgacaccacacacgcggaagaaacgcgtgttgtggtcatg
gatggtgaccgcgtcgaagattacgacgtcgagacatcgaccaagaagcagctcaagggc
aacatctatcttgccaaggtcattcgcgtagagccgagccttcaggccgctttcgtcgaa
tatggcggcaaccgccacggcttcctcgccttcagcgaaatccacccggactatttccag
attcctgtcgcagaccgcgagaagctcatcgcgctccaggaagaagaaattgccgagcgt
ggtgatgcggcggatgatgccgagaccgaaacggtttccgaagacggtgccgataacgaa
gacggcgacaaccacgaccgtcgcgcgcccgaaaccgttggtggcgagcatgatacgggc
gaggaaagcgcgtcgtcgcgccgcacggcccgtttcctgcgcaactacaagatccaggaa
gtcatccgccgccgtcaggtgctgctggtgcaggtcgtcaaggaagagcgtggcaacaag
ggtgcagccctgaccacctacatctcccttgccgggcgctattgtgtcctgatgccgaac
gccctgcgtggcggtggcgtttcgcgcaagatcacttccgatgccgatcgccgccgcctg
cgcgatgtgatcgcggaactcgacctgccgaagtccatggcaatgatcgtccggaccgcc
ggtgccggtcgcccggcacaggaagtgacgcgggactgcgaatacctgctccagctctgg
gacgatatccgctcccacgccctgtcctcggtcgcgccgacgctggtctatgaggaagca
agcctcatcaagcgcgtcatccgcgacctgttttccaaggatatcgaagacatcctcgtg
gatggtgaagcggcctggaagaacgcgcgcgagttcatgcgcctgctgatgcccagcaac
gccaacaaggtcaagctgtggcagaaccgcgggcagagcctgtttgcgcgctacaatgtc
gaaggccatctggacgccatgttctcgccgacggcccgtctgccgtccggtggctatctg
gtcatcaaccagacggaagccctcgtcgccatcgacgtgaattccggcaagtccacctcg
cagcgcaacattgaggaaacggccctgcgcacgaacctcgaagccgccgaggaagtgggt
cgccagctccgtctgcgtgatctggccggtctggtcgtgatcgacttcatcgacatggaa
agccgccgccacaatgctcaggtggaaaagcgcctcaaggaggccctgcgttccgaccgt
gcgcgcatccaggtcgggcatatttcccatttcggtctactggaaatgtcccgccagcgc
ctgcgcccgtccattgcggaatccgtcctcacgccctgcccgcactgtcagggtaccggc
ttcatccgtgggacggaaagctcggccctgcacgtcctgcgtgcaatcgacgaggaaggc
gcacgccagcgttcagccgaaatcgaagtctatgtgggctccgagattgccctctatatc
ctcaaccacaagcgctcctggctggctgacatcgagcgccatcatcggatgcaggtcatc
ttccgtacggaagaaaacctcgctgccgcagatatgcggatcgagcgcctgaaaacccag
acagcggctccggcacaggcccgcgctccggaacggacggaacgcgccgtggagcgtgcg
ccggaaagcgtccgcacgatcgagatcatcgaagaacaggcccccgtcgccctgcgggtg
gaaacgccggtcgtcgatgcggaagtcattgaagatgttgtgccgtcggaaggccaggaa
gacagcaacgatggtcgtcgccgccgccgccgccgccgccgtggtggccgtcgcgagcag
aacggagacgtcgcagcggacgcaccgcaggaccataacgtccatgcgcccgaggaacgt
gagacccccgcctcggacactgccgacgaaaacggcatcattccgggccgccgtcgcacc
cgcttcaagcgcatcgtcaaggaagccgagggctctgaagcgccgcgtgcagaacccatg
gccgaaacccgtgacgtagcgccacggcgccccgcaccgacaccacgccctgccgcacca
gctcccgcagcgcgcaatccgcgtcgccgggaggaacgcgaggagcgtcccgcccagcat
cgctacacgggccctacgcctgctgatccgttcggcggcagcttcgacatcttcgacgtg
attgagcaggcggaatttgaagggacgacacaggcccttcagaccgggatcagcctgccc
acggacgtcgtgatcgaacatgtcccggctgtcgaaacggctgttgccgtggaagagcga
gcagcggaagttccggcaacggaagaggctcccaagccccgccgtggtcgcggacgtcgc
ccggcccgtgccaaggctgcagatgctgctcctgccgaaacggtgacggaagccgcgcct
gtagtggaagtcgctcctgctccggctgtcgaagagcctgtggccgaagaggctcccaag
ccccgtcggacccggacccggcgcactccgaaggcggaggccgtggctactgaagccccg
gctgaagccgcccccgaagctgcgccggctccggctgaagtcgcagcggaagagactgcc
aagccgaagcgcagccggacccgtcgcgcgccaaagaccgccgctgccgaggctccggcc
gaggatggaaacatccttcagccggtaaacattgatgaagtcgctccggcgaagcgtcgt
gcaggatggtggaagcgctga
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