Gluconobacter albidus: A0U94_06985
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Entry
A0U94_06985 CDS
T04736
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gal
Gluconobacter albidus
Pathway
gal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0U94_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gal03400
]
A0U94_06985
Enzymes [BR:
gal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0U94_06985
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0U94_06985
DNA repair and recombination proteins [BR:
gal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0U94_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Ribbon_Prim
Zn_ribbon_IS1595
NFACT_N
Lar_restr_allev
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AQS90755
LinkDB
All DBs
Position
1561237..1562070
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AA seq
277 aa
AA seq
DB search
MPELPEVETVMRGFRDAFEGHRISHISVNRPDLRWPFPADLREKLEGRRILSFRRRAKYI
LMRLEGGWSMLLHLGMSGRLTIGRAGTNATPPAHEHLVLETDSGARAGLVDPRRFGMVDL
VRTSGEDDHRLLAHLGMEPLSPTMTGQALTALFRNRRTPVKSALLDQKLIAGLGNIYVCE
ALFRCGIHPERQACTLTAPETAALSEAIPQILEQAIASGGSSLRDYVQTDGTKGGFQDLH
LVYGREGDPCPNCGEASPIRRITQAGRSTFFCPTCQK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccagagcttccagaagtcgaaaccgtcatgcgcgggtttcgtgatgcctttgaaggg
catcgaatcagccatatttctgtcaaccgcccggaccttcgatggccgtttcccgcagat
ctgcgggagaagctggaaggccggcgcattctctcgttccgcaggcgcgcgaagtatatt
ctcatgcgtcttgagggcgggtggagcatgctgctgcacctgggcatgtcgggccggctc
acgatcggcagggcagggacgaatgcgactccgccagcccacgaacatctggttctggag
acggacagcggtgcgcgggcagggcttgtcgatccccggcgcttcggaatggtcgatctt
gtgcggacatctggcgaggacgatcaccgccttctcgcgcatctgggcatggagcctctt
tctcccacgatgacgggacaggcactgacggcactgttccggaacaggcgtacaccagtg
aaatccgccctgctggaccagaaactgattgccgggcttggcaacatctatgtgtgtgag
gcgctgttccgctgcggtatccatcctgaacggcaagcctgtaccctgaccgctccggag
accgcagcgctttcagaggccatcccgcaaattctggaacaggccatcgcctccggaggg
tcgtccctgcgcgactacgtgcagactgacggcaccaaaggcgggtttcaggacctgcac
ctcgtctatgggcgggaaggggatccatgccccaattgtggagaagccagcccgatccgg
cgcatcacacaggcgggccgttcgacgttcttctgcccgacctgtcagaaataa
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