Gluconobacter albidus: A0U94_08130
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Entry
A0U94_08130 CDS
T04736
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gal
Gluconobacter albidus
Pathway
gal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U94_08130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gal03019
]
A0U94_08130
Enzymes [BR:
gal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0U94_08130
Messenger RNA biogenesis [BR:
gal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0U94_08130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AQS90945
LinkDB
All DBs
Position
complement(1799046..1800350)
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AA seq
434 aa
AA seq
DB search
MTSFAELKLAEPIQKALAEEGYTTPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALPI
LNHIFSNRRPAPPKGVRALVLAPTRELASQIGESFAAYARHMKFSYAVVFGGVGQGRQIE
ATRRGVDVLVAAPGRLLDLIGQKYIDLSSLEILVLDEADRMLDMGFVRDIQRIMALLPKQ
RQTLLFSATMPPSISDLAHSLLKDPATVQVTPESSTVDRINQAVMFVDSNSKKDAALMLL
ESPSVARAVVFTLMKHEANKVAEFLNKNGIRAEAIHGNKSQGARERAMAGFRSGAIKALV
ATDIAARGIDVDEVSHVFNYDLPNVPESYVHRIGRTARAGREGCAVSLCDAEQRAWLRDI
EKKIGKPIPVVTDHPFHSEEARLSTQRPPVLGGGRGGGGGGGRRRSGPPSGGGGRPGGGR
GSAPGRGGPRSGPR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtttcgccgaactcaagcttgccgagccaattcagaaggctctcgcagaagag
ggttacaccacgcccacaccgattcaggccggggctattccctacctgctggaaggtcgt
gaccttctggggctcgcgcagaccggcactggtaaaaccgccgcattcgcgctcccgatt
ctgaaccatatcttctccaaccgtcggcctgcaccgcccaagggcgtccgggctctggtt
ctcgcgccgacgcgtgaactggcgtcccagattggtgaaagctttgccgcttatgcgcgg
cacatgaaattttcctacgctgtcgtgttcggtggcgtggggcagggacggcagatcgag
gcgacccgccgcggtgtggatgttctcgtcgcggcacctggacgtctgctcgatctgatc
gggcagaagtatattgatctctccagtcttgaaatcctcgtgctggatgaagccgaccgg
atgctggacatgggctttgtgcgcgatattcagcgcatcatggccctgctgcccaagcag
cgccagaccctgctgttttcggcaaccatgcccccctccatcagcgatctggcgcattcg
cttctgaaggatccggcaaccgttcaggtcacacctgaatcaagcacggtcgatcgcatc
aatcaggctgtgatgttcgttgactcgaacagcaagaaagatgcggctctcatgctgctc
gaaagcccgagcgtcgcccgggccgtggtctttacgctgatgaagcacgaagccaacaag
gtcgccgaattcctgaacaagaatggaatccgtgcggaagccatccacggcaacaagtcc
cagggtgcccgcgagcgtgccatggcagggttccggagtggtgcgatcaaggcgctggtt
gccacggatattgctgcgcgcggcattgacgtggacgaggtaagccacgtcttcaactac
gatctgcccaacgttccggaatcttacgtccatcgtattggccgtacagcgcgtgcaggc
cgtgaaggttgcgcggtttcgctgtgtgacgccgaacagcgcgcttggctcagggatatt
gagaagaagatcggcaagcccattcctgtcgtgaccgatcatcccttccattctgaagag
gcccgcctgtccacgcagcggccgcctgttctgggtggtggtcgtggcggcggcggaggt
ggcggacgccgccgttccggtccgccctcaggtggtggggggcgtccgggcggtggtcgt
ggcagtgctcccggtcgtggtggcccgcgttccggcccgcgctga
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