Gluconobacter albidus: A0U94_10445
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Entry
A0U94_10445 CDS
T04736
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gal
Gluconobacter albidus
Pathway
gal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0U94_10445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gal03019
]
A0U94_10445
03009 Ribosome biogenesis [BR:
gal03009
]
A0U94_10445
Enzymes [BR:
gal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0U94_10445
Messenger RNA biogenesis [BR:
gal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0U94_10445
Ribosome biogenesis [BR:
gal03009
]
Prokaryotic type
rRNA helicases
A0U94_10445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AQS91333
UniProt:
A0A149TLA6
LinkDB
All DBs
Position
complement(2315723..2317552)
Genome browser
AA seq
609 aa
AA seq
DB search
MPFPDTHPALKRALEARGYEQLTPVQEAVLQPGLDERDLLVSAQTGSGKTVAFGLAIAPT
LLGDADRLPPSPQPMALVIAPTRELALQVQSELKWLYAETGARIASCIGGTDARSEAREL
SRGVHIVVGTPGRLCDHLSRGSLDLSALRCVILDEADEMLDMGFRDELEQLLDAAPTERR
TLLFSATIAREIASLARRYQKNAERIDTVSGAKQHSDITYRCVVTPPQEIERSLVNVLRF
YESPTAMVFCNTRMMVNQVQATLLERGFASVAISGEMGQNERSRAIESLRSGQARVCVAT
DVAARGIDVPALNLVIHASIPTAAETLLHRSGRTGRAGRKGTSVLMVPVSQRRKAERLLQ
MAKIQAEWEAVPTAAAIAEQDKTRLMDDPILTNAVDDMSDELVNQLAEKYDATKLAAALV
GLYRARLPKVEQIRPMSVEAPRHTERGERAPREEHVMAGEWFKMSVGRTERADPKWLIPL
ICRLGGVQKREIGSIRIDQEQTYFQIADESVARFKSCLAGAEADEVTIEPSEAPAGGMGP
RGRNPGEGKRFGGGGRPGGGGFKGGPRGGAGGGAGGGYKGRGGSGYGRPKPAAGGEGPRG
DGSSRKRRS
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcccgatacccatcctgcccttaagcgcgcccttgaggcacgtggctacgaa
cagctgactcctgttcaggaagctgttctgcagccggggctggacgagcgcgacctgctg
gtttccgcgcagacggggtcgggcaagaccgtcgccttcggcctggccatcgctccgacc
cttctcggagatgccgatcgccttccgccgtcccctcagcccatggcgctcgtgattgcg
ccgacgcgtgagctggcgcttcaggtccagtccgaactcaaatggctctatgccgaaacc
ggtgcccgcatcgcgagctgcattggtggcacggatgcccgtagcgaagcccgcgaactg
agccgcggcgttcatatcgttgtcggtacgccgggccgtctgtgcgatcatctgtcgcgc
ggctccctcgacctgtccgccctgcgctgcgtcatcctcgacgaagccgacgaaatgctg
gacatgggcttccgtgacgagctggagcagcttctcgacgccgctccgacggagcggcgc
accctgctgttctccgcgacgatcgcccgcgagatcgcgtcccttgcgcgtcgctaccag
aaaaatgccgagcggatcgacacggtttcgggtgcgaagcagcattccgacattacctat
cgctgcgttgtcacgccgccgcaggaaatcgagcgctcgctcgtcaatgtgctccgtttc
tacgagagcccgaccgccatggtgttctgcaacacccgcatgatggtcaatcaggttcag
gcaacgctgcttgagcgtggttttgcatccgtcgccatctctggcgagatgggtcagaac
gagcgcagccgtgcgatcgagagcctgcgttccggtcaggcccgcgtctgtgttgcgacc
gacgttgcggcccgtggtattgacgtcccggccctgaacctcgtgatccacgccagcatc
ccgacagcagccgagaccctgctgcaccgttcgggccggacaggccgtgcgggccgcaag
ggcaccagcgtgctgatggttccggtgagccagcgtcgcaaggctgaacgtctgcttcag
atggcaaagatccaggcggaatgggaagctgttccgacggctgcggcgattgccgagcag
gacaagacccgtctgatggacgatccgatcctgacgaatgccgtggacgacatgtccgac
gaactggtcaaccagctcgccgagaaatacgacgccacgaagctggcagctgcgctggtg
ggcctgtaccgcgcgcgtctgccgaaggtcgagcagatccgtccgatgtccgtcgaagcc
ccgcgtcacacggagcgtggtgaacgtgcgccgcgtgaagagcacgtcatggcgggcgag
tggttcaagatgagcgtcggccggaccgagcgcgccgatccgaagtggctgatcccgctg
atctgccgtctgggtggcgtgcagaagcgcgaaatcggcagcatccgcattgatcaggaa
cagacctatttccagatcgccgatgagagcgtggcccgcttcaagtcctgcctcgccggt
gcagaagccgatgaagtgacgatcgagccgtccgaagcgcctgcgggcggcatgggtccc
cgtggtcgcaaccccggtgaaggcaagcgctttggcggcggtggccgtccgggtggcggc
ggcttcaagggtggtccgcgcggcggtgctggtggtggcgccggtggtggctacaagggc
cgtggcggttcgggttatggtcgcccgaagcccgcagccggtggtgaaggcccgcgcggc
gatggttcgagccgcaagcgccgttcctga
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