Gordonia amarae: GII34_01240
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Entry
GII34_01240 CDS
T07320
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
gam
Gordonia amarae
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_01240 (vsr)
DNA repair and recombination proteins [BR:
gam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
GII34_01240 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
QHN20359
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All DBs
Position
complement(299103..299549)
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AA seq
148 aa
AA seq
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MRRSSLPLTSADAATSRRMSRQRTRDTQPELLLRRELHRRGLRYRVDAPLPGMPRRRADI
LFSRAKVAVFVDGCFWHGCPEHRPSPTNNGDWWSVKLDRNIERDRDTDSHLQSLGWTVLR
VWEHEDIEDAANGVESAVRPAPSDSASL
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctcctcacttcccctgacgtcggcagatgcagccacatcgcggcgcatgtca
cggcaacgaacgcgcgatacgcaacccgagctgcttctccgacgtgagctccaccggcgc
ggtctgcggtaccgagtcgacgctccactccccggtatgccgcgtcgccgcgcagacatc
ctgttcagccgcgccaaggtcgcggtgttcgtcgacgggtgcttctggcacggatgcccc
gagcacaggccctctccgacgaacaacggtgactggtggtctgtcaaactcgaccgaaat
atcgagagggaccgcgacaccgactcccacttgcagtcacttggttggacggtactccgg
gtctgggagcacgaggacatcgaggacgctgcaaatggagtcgaaagcgccgtgcgacca
gcaccttccgactccgcctcgttatga
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