Gordonia amarae: GII34_01835
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Entry
GII34_01835 CDS
T07320
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gam
Gordonia amarae
Pathway
gam00071
Fatty acid degradation
gam00280
Valine, leucine and isoleucine degradation
gam00310
Lysine degradation
gam00362
Benzoate degradation
gam00380
Tryptophan metabolism
gam00410
beta-Alanine metabolism
gam00640
Propanoate metabolism
gam00650
Butanoate metabolism
gam00907
Pinene, camphor and geraniol degradation
gam00930
Caprolactam degradation
gam01100
Metabolic pathways
gam01110
Biosynthesis of secondary metabolites
gam01120
Microbial metabolism in diverse environments
gam01200
Carbon metabolism
gam01212
Fatty acid metabolism
Module
gam_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GII34_01835
00650 Butanoate metabolism
GII34_01835
09103 Lipid metabolism
00071 Fatty acid degradation
GII34_01835
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GII34_01835
00310 Lysine degradation
GII34_01835
00380 Tryptophan metabolism
GII34_01835
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GII34_01835
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GII34_01835
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GII34_01835
00930 Caprolactam degradation
GII34_01835
Enzymes [BR:
gam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GII34_01835
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GII34_01835
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GII34_01835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
2-Hacid_dh_C
DAO
F420_oxidored
Acetyltransf_CG
GIDA
NAD_binding_8
UDPG_MGDP_dh_N
DUF2680
KARI_N
Shikimate_DH
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
SPP1_GP23-1
Motif
Other DBs
NCBI-ProteinID:
QHN20461
LinkDB
All DBs
Position
432249..434417
Genome browser
AA seq
722 aa
AA seq
DB search
MSDNMIRWEKGEDGIVVLTMDDPNQGANTMNALYTTSMAATVDRLEAEQDDITGVVITSA
KKTFFAGGDLKDMTAEHTETKQEIAARITATTNGMKAVLRRLENFGKPVVSAINGAALGG
GLEIALHTHHRIAADVRGNQIGLPEVTLGLLPGGGGVVRVVRMLGIQNGLMSVLLQGTRF
KPAKAKEIGLIDEVVAGVDELIPAAKAWIAANPDAQQPWNVKGFKIPGGEPTNPKFAANL
PAIPALLRKQIKGANMPAPRAIMAAAIEGAYVDVATADEIETRYFVSLVTGQVAQNMIKA
FFFDLQHINGGGSRPQGYDKYTAKKVGVIGAGMMGAAIAYVSAQSGIEVVLKDTTLENAE
RGKGYSVKLVEKAVAKGKLTQEKADALLARITPTEKAEDFKGVDLVIEAAFESVEVKNKV
FAEIEDIVEPDAILGSNTSTLPITLLAGGVKRQEDFIGIHFFSPVDKMPLVEIIKGEKTS
DAVLAKVIDYTLQIRKTPIVVNDSRGFFTSRVIGTFINEALAAVGEGIEPAFIEQAGSQA
GYPAPPLQLSDELTLTLMQKIRKETVAAAEAAGIEVPPHASYDVVDWMVENGRASRKDGA
GFYNYEDGKRGLLWQGVRDHFKSGSNTIPLEDLKERMLFAEALETVKCFDEGVLNSVADA
NIGSIFGIGFPAWTGGVIQYINGYEGGLQGFVDRARDLASKYGAHFEPPASLVEKAAKGE
KY
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacatgatccgttgggaaaagggtgaagacggcatcgtcgtgctcaccatg
gacgatcccaaccagggcgccaacacgatgaacgccctctacaccacctcgatggcggcc
acggtcgaccgcctcgaagccgaacaggacgacatcaccggtgtggtgatcacctcggcc
aagaagaccttcttcgccggcggcgacctcaaggacatgaccgccgagcacaccgagacc
aagcaggagatcgccgcccggatcaccgccaccaccaacggcatgaaggcggtgctgcgc
cgcctggagaacttcggaaagcccgtcgtctccgccatcaacggtgccgccctcggcggt
ggcctggagatcgcgctgcacacccaccaccgcatcgcggccgacgtgcgcggcaaccag
atcggcctgcccgaggtcaccctcggcctgctgcccggcggcggcggcgtcgtgcgcgtc
gtgcgcatgctcggcatccagaacgggctgatgagcgtcctgttgcaaggcacccgcttc
aagcccgccaaggccaaggagatcggcctgatcgacgaggtcgtcgcaggcgtcgacgag
ctgatccccgccgccaaggcatggatcgcggccaaccccgacgcgcagcagccgtggaac
gtcaagggattcaagatccccggcggcgagcccaccaaccccaagttcgcggccaacctg
cccgccatcccggcgctgctgcgcaagcagatcaagggcgccaacatgccggccccgcgc
gccatcatggccgccgccatcgagggcgcctacgtcgacgtcgccaccgccgacgagatc
gagacccgctacttcgtgtcgctggtgaccggtcaggtcgcgcagaacatgatcaaggcg
ttcttcttcgacctgcagcacatcaacggcggcggctcgcggccgcagggctacgacaag
tacaccgccaaaaaggtcggcgtcatcggcgccggcatgatgggtgcggccatcgcgtac
gtgtcggcgcagtccggcatcgaggtcgtcctcaaggacaccaccctggagaacgccgag
cgtggcaagggctactcggtgaagctggtcgagaaggccgttgccaagggcaagctgacc
caggagaaggccgacgcgctgctggcccgcatcaccccgaccgagaaggccgaggacttc
aagggtgtcgatctggtgatcgaggccgcgttcgagtcggtcgaggtcaagaacaaggtg
ttcgccgagatcgaggacatcgtcgaacccgacgccatcctgggctccaacacctccacc
ctgcccatcacgcttctcgcgggcggtgtgaagcgtcaggaagacttcatcggaatccac
ttcttctcgccggtcgacaagatgccgctggtggagatcatcaagggtgagaagacctcg
gatgcggtgctggccaaggtcatcgactacacgctgcagatccgcaagaccccgatcgtg
gtcaacgacagccgtggcttcttcaccagccgcgtcatcggcaccttcatcaacgaggcc
ctcgcggccgtcggtgagggcattgagccggcgttcatcgagcaggccggttcgcaggcg
ggctaccccgcgccgccgctgcagctctcggatgagctgacgctcaccctgatgcagaag
atccgcaaggagaccgtcgccgcggccgaggccgccggtatcgaggtaccgccccacgcc
tcgtacgacgtcgtcgactggatggtcgagaacggccgcgcctcccgcaaggacggcgcc
ggcttctacaactacgaggacggcaagcgcggcctgctgtggcagggtgtgcgcgaccac
ttcaagtcgggcagcaacaccatcccgctcgaagacctcaaggagcgcatgctcttcgcc
gaggccctcgagaccgtcaagtgcttcgacgagggtgtgctcaactcggtggccgacgcc
aacatcggctcgatcttcggtatcggcttcccggcctggaccggtggcgtgatccagtac
atcaacggctacgaaggcggcctgcagggcttcgtcgaccgcgcccgcgacctggcgtcc
aagtacggcgcccacttcgagcccccggcctcgctcgtcgagaaggccgccaagggtgag
aagtactga
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