Gordonia amarae: GII34_02680
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Entry
GII34_02680 CDS
T07320
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
gam
Gordonia amarae
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
GII34_02680
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Paralog
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHN20603
LinkDB
All DBs
Position
complement(613419..615977)
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AA seq
852 aa
AA seq
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MQNTQHFRGDQGHSYGEQLLAHVLTDSLPGPLPGPGSAAAHRHGPATTDGERLTTDTGTG
TPASRSGSTHNGIERTSVRATAGPGHETGTAKTGDIGTKDSPLTHISVINSTTANFADWP
DWVPSTLAQALSQHGISRPWTHQERAASLAHTGSHVVVSTPTASGKSLAYQLPILTALLT
DPTATALYLAPTKALGADQIRAVAELTSASPEFGHLQPCAYDGDTEPEIRQWARAHSRWI
FTNPDMLHVGILSGHTRWRHFFRNLRYVVLDECHHYRGVFGSHTALVLRRLLRVARAAGA
APVVIASSATVARPAQSLSRLIGEPAVAVTDDGSPHGERTVALWQPGFVPAVSGENGAPV
RRSAGAESARLLADFVIEGARTLCFTRSRVGAELTARQARQLLAAAAPDLVGKVAAYRAG
YLADDRRRLERAINDAELTGVATTNALELGVDISGLDAVIVAGYPGSVASFWQQAGRAGR
QHHSGDSLVVLVARDDPLDTYLVHHPETLLDKPVEAAVTDPGNPYILGPHLLCAAAELPL
TERDVDDWDARTVVDDLTARGELKRRRAGWYVGAGIEPHAQISLRGGSGDEVLIVDTTTS
RLLGTVDAVRAMSTVYAGAVHIHQGETFVVDELDLDDGLALTHPEEPDWTTSARERTGIT
LGRIISERKYGPLTVAFAEVEVTHQVIGYLRTLLTGEVLDSVPLDMPEQTLPTRAVLYTL
TPEALADAGIDPARVPGALHAAEHAAIGLLPLVATCDRGDIGGLSTTAHPGTGLPTVFVY
DGHLGGAGFAERGHEAFATWIDATREAISSCGCASGCPSCVQSPKCGNGNEPLDKAGAIA
VLGLITDQLSGA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacacacaacatttccggggtgaccagggccactcctacggagagcaactcctc
gctcatgtactgaccgactccctccccggccccctccccggcccaggatccgccgccgcc
caccgccacggccccgcgacaacggacggggagcggctcacgacggacacggggactggc
acaccggcgtcccgctccggtagcacccacaacggaatcgagcgtacgagcgtccgggcc
accgccggtcccggccacgaaaccggtactgccaaaacaggtgacatcgggaccaaagac
tcacccctgacccacatttccgtaatcaattccaccacagcaaatttcgcggattggccg
gattgggtacctagtacccttgcgcaagccctgtcgcagcacgggatttcgcggccgtgg
acccatcaggaacgcgccgcctcactcgctcacaccggctcccacgtcgtggtgagcacg
ccgacggcgtcgggaaagtcgttggcgtaccagctcccgatcctcaccgcactgctcacc
gaccccaccgcgacggcgctgtacctcgccccgacgaaggccctcggcgccgaccagatc
cgcgccgtcgccgaactgacctcggccagtccggaattcggccacctacagccgtgcgca
tatgacggcgacaccgagccggagatacggcagtgggcgcgcgcgcattcccgctggatt
ttcaccaatcccgatatgttgcacgtcgggattctgtcggggcatacccgatggcggcac
ttcttccgcaacctgcgttacgtggtactcgacgaatgtcaccattatcggggggttttc
ggttcacataccgcgctggttctgcgcagactgctccgcgtcgcgcgggccgccggcgcc
gccccggtggtcatcgcctccagcgccacggtggcccggcccgcccagtcgctgtcccgg
ctcatcggcgagcccgcggtcgccgtcaccgacgacggctccccgcacggcgaacgcacc
gtcgcgctctggcaacccggtttcgtgcccgcggtcagcggcgagaacggcgcgccggtg
cgacgctccgccggagccgaatcagcccggctgctggccgatttcgtgatcgagggggcg
cggacgctgtgcttcacccgcagccgggtgggtgccgaactcaccgcccggcaggcccgg
cagctcctcgccgcagccgcacccgatctcgtcggcaaggtggccgcctaccgggccggg
tatctcgccgacgaccggcgcaggctcgaacgcgccatcaacgacgccgagctgaccggg
gtggccaccaccaacgctctcgaactcggcgtcgacatcagcggcctcgacgccgtcatc
gtcgccggttatccgggcagcgtcgcctccttctggcagcaggcgggccgggccgggcgt
cagcaccactccggtgattcgctggtggtgctggtggcccgcgacgatccgctcgacacc
tacctggtgcaccatcccgagacgctcctcgacaagcccgtcgaggcggcggtcaccgac
ccgggaaacccgtacatcctcggtccgcacctgctgtgcgccgccgccgaactgccgctc
accgaacgcgacgtcgacgactgggacgcccgtacggtcgtcgacgatctcaccgcgcgg
ggcgagctcaaacggcgcagggccggctggtacgtcggcgcgggcatcgagccgcacgcg
cagatcagcctgcgcggtggcagcggcgacgaggtgctgatcgtcgacaccaccacttcg
cgcctgctcggcaccgtcgacgcggtgcgcgcgatgtccacggtgtacgccggggcggtg
cacatccaccagggcgagacgttcgtcgtcgatgaactcgacctcgacgacggtctggcc
ctgacgcacccggaggaaccggactggacgacatcggcccgcgagaggaccgggatcacg
ctggggcggatcatctccgagcgcaagtacggcccgctgaccgtcgccttcgcggaggtg
gaggtgacccatcaggtgatcgggtacctgcgcaccctgctcacgggcgaggtgctcgac
tcggtgccgctggacatgccggagcagacgctgccgacgcgggcggtgctgtacacgctc
acccccgaggcgctggcggacgcgggtatcgacccggcccgggtgccgggtgcgctgcac
gccgccgagcacgcggcgatcgggctgttgccgctggtggcgacgtgcgaccgcggcgac
atcggcggcctgtccaccaccgcgcaccccggcaccgggctgccgacggtgttcgtctac
gacggtcatctcggcggcgcgggcttcgccgaacgcggtcacgaggcgttcgccacctgg
atcgatgccacccgcgaggccatctcgtcgtgtggctgcgcctcgggctgcccgtcgtgt
gtgcagtcgcccaaatgcggcaacggcaacgaacccctggacaaggcgggggcgatcgcc
gtgctcggcctgatcaccgaccagctgtccggcgcctga
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