Gordonia amarae: GII34_03300
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Entry
GII34_03300 CDS
T07320
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
gam
Gordonia amarae
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gam03021
]
GII34_03300
Transcription machinery [BR:
gam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GII34_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
KORA
HTH_24
DUF7343
HTH_Crp_2
HTH_3
HTH_AsnC-type
DUF134
IF2_N
MarR
Sigma70_ECF
Crp
HTH_AraC
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
QHN24132
LinkDB
All DBs
Position
745659..746435
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AA seq
258 aa
AA seq
DB search
MVGETEAGDRDDYGEVARTIKAMRQQRDPHHRSELRSRAIERCLPLADHVARRFSDRGEP
FDDLVQVARIGVVHSVDRFDPERGTDFLSLAVPTVMGEVRRYFRDTAWTMRVPRRVKETS
LHIGKAVDELTQRLGRSPRPSELADELGTPVSEVIEGLVARSAYRTDSIDAERDDENRSL
GETLGERDGRIAEIDDLVTVRPALDELPERERQILTLRFFHEMSQSEIAREVGLSQMHVS
RLLSRSLAALRKAVVPVG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggtgggcgaaaccgaagcgggcgatcgtgacgactacggcgaagtcgcccggaccatc
aaggccatgaggcagcagcgtgatccacaccaccgctccgaactgaggtcccgggccatc
gagcgttgcctgcccctggccgatcacgtggcccgccgattctccgatcgcggagaaccg
ttcgacgacctggtgcaggtggcgcgtatcggggttgtccactccgtcgacaggttcgat
cccgaacggggcacggacttcctctcgctcgcggtgcccacggtgatgggcgaggtgcgc
cggtactttcgtgacacggcatggacgatgcgtgttccccggcgggtcaaagagacatcg
ctgcacatcggcaaagcggtcgacgaactgactcagcgcctgggccgctctccgcggccg
agtgaactcgccgacgaactcggcactccggtgagcgaggtgatcgaagggctcgtcgcg
aggtctgcgtaccgaacggactcgatcgacgctgagcgagatgacgagaaccgttccctg
ggtgagacattgggtgagcgtgacggcagaatcgccgagatcgacgacctggtgacggtg
cgtcccgcgctcgacgagttgcccgagcgggagcggcagatcctgaccttgcggttcttc
cacgagatgtcacaaagcgagatcgcacgggaggtcggcctgtcgcagatgcatgtgtcc
cggctgctgtcaaggtcgttggccgcgctacggaaagcggttgtgcccgttggataa
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