Gordonia amarae: GII34_07170
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Entry
GII34_07170 CDS
T07320
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gam
Gordonia amarae
Pathway
gam00260
Glycine, serine and threonine metabolism
gam00460
Cyanoamino acid metabolism
gam00630
Glyoxylate and dicarboxylate metabolism
gam00670
One carbon pool by folate
gam00680
Methane metabolism
gam01100
Metabolic pathways
gam01110
Biosynthesis of secondary metabolites
gam01120
Microbial metabolism in diverse environments
gam01200
Carbon metabolism
gam01230
Biosynthesis of amino acids
gam01240
Biosynthesis of cofactors
gam04981
Folate transport and metabolism
Module
gam_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GII34_07170
09102 Energy metabolism
00680 Methane metabolism
GII34_07170
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GII34_07170
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GII34_07170
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GII34_07170
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GII34_07170
Enzymes [BR:
gam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GII34_07170
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
eCIS_core
SelA
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QHN21351
LinkDB
All DBs
Position
1579534..1580841
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AA seq
435 aa
AA seq
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MTQNPDSVNAQSLADLDPDVAAAMAGELSRQRDTLEMIASENFVPRAVLQAQGSVLTNKY
AEGYPGRRYYGGCEHVDVVEDIARNRAKELFGADFANVQPHSGAQANAAVLQALMEPGET
MLGLDLAHGGHLTHGMRLNFSGKLYENAFYGVSKEDFRIDMDEVRKIALDTKPKVIVAGW
SAYPRTLDFAAFRSIADEVGAYLWTDMAHFAGLVAAGLHPSPVPHSDVVSSTVHKTLGGP
RSGIILAKQEWAKKLNSAVFPGQQGGPLMHVIAAKAVALKIAGTEEFADRQRRTLSGAKI
LADRLTGEGVAKAGVSVLTGGTDVHLVLVDLRNSALDGQQAEDLLHEVGITVNRNAVPFD
PRPPMVTSGLRIGTPALATRGFGDEQFTEVADIIGTALAAGTGADVAALRARVSQLALDF
PLYDGLEEWGLMSRI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaaccctgattccgtgaatgcgcagtccctggccgatctcgatcccgatgtg
gccgccgcgatggccggtgagctgagccgtcagcgtgacacgctggagatgatcgcgtcg
gagaacttcgtcccgcgcgccgtgctgcaggcccagggcagcgtgctgaccaacaagtac
gccgagggctaccccggacgtcgctactacggcggctgcgagcacgtcgacgtcgtcgag
gacatcgcccgcaaccgggccaaggaactgttcggcgccgatttcgccaacgtgcagccg
cattcgggtgcgcaggccaacgccgctgtgctgcaggccctcatggagccgggcgagacc
atgctcggtctcgacctggcccacggcggacacctcacccacggcatgcgcctgaacttc
tcgggcaagctgtacgagaacgccttctacggtgtcagcaaggaagacttccgcatcgac
atggacgaggtgcgcaagatcgccctcgacaccaagccgaaggtgatcgtggccggctgg
tcggcctacccgcggactctcgacttcgcggcgttccgctcgatcgccgacgaggtgggc
gcctacctgtggaccgacatggcgcacttcgccgggctggtcgccgcgggcctgcacccc
tcacctgtcccgcattcggatgtggtgtcctcgaccgtccacaagacgctcggtggcccg
cgctcgggcatcatcctggccaagcaggaatgggccaagaagctcaactcggcggtgttc
cccggccagcagggcggcccgctcatgcacgtgatcgccgccaaggccgtcgccctcaag
atcgcgggcaccgaggagttcgccgaccgccagcgccgcaccctgtcgggcgccaagatc
ctcgccgaccggctcaccggtgagggtgtcgccaaggccggtgtctcggtcctcaccggc
ggcaccgatgtgcatctggtgctcgtcgacctgcgcaacagcgccctcgacggccaacag
gccgaggatctgctgcacgaggtcggcatcaccgtcaaccgcaacgccgtcccgttcgac
ccgcgtccgccgatggtcacctcgggtctgcgcatcggcaccccggcattggccacccgc
ggcttcggcgacgaacagttcaccgaggtcgccgacatcatcggcaccgcgctcgccgcc
ggcacaggtgccgacgtcgccgctctgcgggcccgtgtctcccagctcgccctcgacttc
ccgttgtacgacgggctcgaggagtggggcctgatgagccgcatctga
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