Gordonia amarae: GII34_08205
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Entry
GII34_08205 CDS
T07320
Name
(GenBank) LytR family transcriptional regulator
KO
K27775
cell wall biosynthesis protein
Organism
gam
Gordonia amarae
Pathway
gam00572
Arabinogalactan biosynthesis - Mycobacterium
gam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
GII34_08205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LytR_cpsA_psr
LytR_C
Motif
Other DBs
NCBI-ProteinID:
QHN21528
LinkDB
All DBs
Position
complement(1830330..1832531)
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AA seq
733 aa
AA seq
DB search
MRGDEDGRPVRRGAEPRVRAAAERGDRPRAGDRPRAGERRETDPRGRGTEPPARRVDRSP
DRASGEIHRDTPQRRPAASDERRRGRKPAADRRATDRRSAPTRLPGDPRDGHDLDVRRSS
GEIHTSPRRGAADRDDAPRRRVRRPGGDANPATPDKTSGKVPTKTSGPAADKTAPKRKKP
TPRTAQPKEKASAPSVVTPDEPDTVTADDTATTSGGAPDIAPAATLAESGKTTAASTPPP
AGVAGAVRTAMRERHNVSRMLVALLSVTVLVCTGYAWHSISDLRESVTQLSGLGLGGGGD
GATDILLVGTDSRTDAKGNPLDAKELRWLRSADDVATNTDTILLIRIPNDGSSATAISIP
RDSYVDVPGIGMSKINAAYGATREHVRREAVESGKPEKEAEDDGTKAGRKALIDTVSNLT
GVRVDHYAEVGLLGFVLLTNAVGGVDVCLKNPVSEPLSGARFRAGKQTLTGPKALSFVRQ
RHDLPRGDLDRITRQQVFMASLAQKVLSAKTLTSPSKVSELQRAAARSIVIDDGWDIVRF
VQQLKDLSGGNIKFSTIPVITEHGWSEDGRQSVVQVDPAQVKKATENLLKSDKDKSKDAE
RGDYIVDVTNGGTVDGLASNVSNILSGKGYQRGKTATAGTNDLDSVIVAHSKDDAGARKL
AKDLGGLTVREDKSVPEKQLRVILTNSYAGPGSPADPTNEIAQTQQNGEDVNSAPGGNRS
PITAESDGPMCVN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtggtgatgaggatggacgtccggtgcgtcgcggcgccgagccgcgtgtacgtgcg
gccgccgaacgtggtgaccgcccccgcgccggtgatcgtccccgggccggtgaacgacgc
gagacggatccgcgtggacgcggcaccgaaccgccggcacgccgggtggatcggtccccg
gaccgggcgagcggcgagatccatcgagacacaccacaacgccggcccgcagcttccgac
gagcgccgacgtggtcgcaagcccgccgccgaccgccgtgccaccgatcgccgatcggcg
cccacgcggctgcccggtgatccccgcgacggccacgacctggacgttcgccgttcgtcc
ggcgagatccacacctcaccgcggcgcggggcggcggatcgggacgacgctccccgtcgt
cgcgtccggcgaccgggcggcgatgcgaacccggcgacccccgacaagacctcaggcaag
gtcccgaccaagacttcgggcccggctgccgacaagacagcaccgaaacggaagaagccc
accccgcgcacggctcaacccaaagagaaggcttccgcgccgtcggtcgtcacaccggac
gagccggacaccgtcaccgccgacgacacggccacgacgtccggcggcgccccggatatc
gcacccgcggccacgctcgcagagtccggcaagaccacagccgcctccacaccgccaccg
gcgggcgtcgcgggcgcggtgcgcacggcgatgcgcgagcgccacaatgtctcgcgcatg
ctggtggcactgctgagcgtgaccgtcctggtgtgcaccggctacgcctggcacagcatt
tccgatctccgcgagagcgtcacacagttgtcgggactcggcctcggcggcggtggtgac
ggcgccaccgacattctgctcgtgggcaccgactcacgtaccgacgccaagggaaacccg
ctggacgccaaggaattgcggtggctgcggtcggccgacgatgtggccaccaacaccgac
acgatcctgttgatccgtatcccgaacgacggctcgtcggcgacggccatctccattccc
cgcgactcgtatgtcgacgttccgggtatcgggatgagcaagatcaacgccgcctacggc
gcaacccgcgagcacgtgcgccgcgaggccgtcgaatccggaaagccggagaaggaggcc
gaggacgacggcaccaaggcgggccggaaagcgttgatcgacaccgtgtccaacctgacc
ggggtgcgggtcgatcattacgccgaggtcgggctgctcggcttcgtgctgctcaccaac
gccgtcggcggcgtcgatgtgtgcttgaagaaccctgtgtccgaaccgctttcgggtgcc
cgattccgggccggcaagcagaccctgacgggcccgaaggcgctgagcttcgtccgccag
cggcacgacctgccgcgcggggacctcgaccggatcacccgccagcaggtgttcatggcc
tcgctcgcgcagaaggtgttgtccgccaagacattgacgagcccgtcgaaggtatcggag
ctgcagcgcgccgcggcgcggtcgatcgtgatcgacgacggctgggacatcgtgagattc
gtgcagcagctcaaggacctcagcggcggcaacatcaagttctccacgatcccggtgatc
accgaacacgggtggagcgaggacggcaggcagagcgtcgtccaggtggatccggcccag
gtcaagaaggccaccgagaatctcctcaagagcgacaaggacaagtccaaggacgccgag
cgcggcgactacatcgtggatgtcaccaacggcggcaccgtcgacggcctggcatcgaac
gtgtcgaatatcttgtccggcaagggatatcagcgcggcaagacggcgacggccggtacg
aacgacctggattcggtgatcgtggcacactccaaggacgatgcgggcgcacgcaaactg
gccaaggacctcggcgggctgaccgtccgcgaggacaagtccgtgccggagaagcagctg
cgggtgatcctcaccaattcgtatgccggaccgggctccccggccgatccgaccaacgag
atcgcgcagacgcagcagaacggtgaggacgtcaattcggcaccgggcggcaaccgttcg
ccgatcaccgccgagtccgacggccccatgtgcgtcaactga
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