KEGG   Gordonia amarae: GII34_08945
Entry
GII34_08945       CDS       T07320                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
gam  Gordonia amarae
Pathway
gam00061  Fatty acid biosynthesis
gam00071  Fatty acid degradation
gam01100  Metabolic pathways
gam01212  Fatty acid metabolism
gam02024  Quorum sensing
gam04146  Peroxisome
Module
gam_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:gam00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GII34_08945
   00071 Fatty acid degradation
    GII34_08945
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GII34_08945
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GII34_08945
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:gam01004]
    GII34_08945
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gam04147]
    GII34_08945
Enzymes [BR:gam01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GII34_08945
Lipid biosynthesis proteins [BR:gam01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GII34_08945
Exosome [BR:gam04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GII34_08945
  Exosomal proteins of breast cancer cells
   GII34_08945
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C
Other DBs
NCBI-ProteinID: QHN21643
LinkDB
Position
complement(2004108..2005892)
AA seq 594 aa
MDQYSTPSNFTVDEKATTVDALLRHRAETPHATLLRKLSGGTWVDVDAKTFADEVDAVAK
GIIASGINPGDRVALLSSTRYEWTVIDYAIWRAGAVTVAIYDTSSPDQVQWILEDSGTKL
LILELAKHRAHHQEVIAGAPALNETLVIDEGAIATLTERGAIVDDAELDTRHTNAVASDA
ATLIYTSGTTGRPKGVALTHANLLSESAACAQAVGPGLVEGNTTLLFLPLAHVFARAIEV
GCIENKVILGHTSDIPNLVAHLDKFKPHYVLSVPRVFEKVYNSAKQKAYDGGKGGIFEKA
SAAAVEYSKSLDAGGPGLLLKLKHALFDKLVYGKLRAALGGNCIGAVSGGAPLGDRLGHF
FRGVGIPVYEAYGLTETSAGIIANSAADQHVGSVGRPVPGSAVAIAADGEILLKGPMVFG
GYWQNDKATSESIIDGWFHTGDIGKLVDGFLYITGRKKEIIVTAAGKNVSPAQLEDTIRA
HPLVSQCLVVGDKKPFIAALITLDQEVIPGWLERHNLAADTPLSALATNEKILAELQEAV
DSANKSVSKAEAIKKFSVLDTDFTIETGELTPTLKLKRNIIHDSYKVAIADLYT
NT seq 1785 nt   +upstreamnt  +downstreamnt
atggatcagtactccaccccgtcgaacttcacggtcgacgagaaggcgacgaccgtggac
gcgctgctgcgccaccgagcggaaactccccatgcgacgctgctgcgcaagctgtccggc
ggcacctgggtagacgttgacgccaagaccttcgccgacgaggtggacgcggtcgccaag
ggcatcatcgcctccggcatcaaccccggcgaccgggtggccctgctctcctccacccgc
tacgagtggacggtcatcgactacgccatctggcgagccggagccgtcaccgtcgccatc
tacgacacctcctcgcccgatcaggtccagtggatcctggaggattccgggaccaagctg
ctgatcctcgagctggccaagcaccgcgcgcaccatcaggaggtgatcgcgggggctccg
gcgctcaacgagaccctggtcatcgatgagggtgcgatcgcgaccctcaccgagcgcggc
gcgatcgtcgacgacgccgaactcgacacccgccacaccaacgccgtggcctccgacgcc
gccaccctgatctacacctcgggcaccaccggacggcccaagggcgtcgcgcttacccac
gccaacctgctgtccgagagcgccgcctgcgctcaggccgtgggtccgggcctggtcgaa
ggcaacaccacgctgctgttcctcccgctggcgcatgtgttcgcccgcgccatcgaggtc
ggctgcatcgagaacaaggtgatcctcggccacaccagcgacatccccaacctcgtcgcc
cacctcgacaagttcaagccgcattacgtgctgtcggtgccgcgcgtgttcgagaaggtc
tacaactcggccaagcagaaggcgtacgacggcggcaagggcggcatcttcgagaaggcc
tcggccgcggccgtcgagtacagcaagtccctcgacgccggcggtcccggtctgcttctc
aagctcaagcacgccctgttcgacaagctcgtgtacggcaagctgcgtgccgccctcggc
ggcaactgtatcggcgcggtgtcgggcggtgccccgctcggcgatcgtctcggccacttc
ttccgcggcgtcggcatcccggtgtacgaggcctacggcctcaccgagaccagcgcaggc
atcatcgccaacagtgccgccgaccagcacgtcggctcggtgggccggccggtgccggga
tccgcggtggccatcgccgccgacggggagatcctgctcaagggcccgatggtgttcggc
ggctactggcagaacgacaaggccacatccgagtcgatcatcgacggctggttccacacc
ggtgacatcggcaagctggtcgacggattcctctatatcaccggccgcaagaaggagatc
atcgtcaccgcggccggcaagaacgtctccccggcccagctcgaagacaccatccgggcg
catccgctggtgagccagtgcctggtggtgggcgacaagaagccgttcatcgcggccctg
atcaccctcgaccaggaggtcatccccggctggctcgagcgccacaacctggcggccgac
accccgctgagcgcgctggccaccaacgagaagatcctcgccgagctgcaggaggcggtc
gactccgccaacaagtcggtgtccaaggccgaggcgatcaagaagttctcggtgctcgac
accgacttcaccatcgagaccggtgaactgacgcccacgctcaagctcaagcgcaacatc
atccacgactcgtacaaggttgccatcgccgacctgtacacgtag

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