Gordonia amarae: GII34_13420
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Entry
GII34_13420 CDS
T07320
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
gam
Gordonia amarae
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gam03009
]
GII34_13420
Enzymes [BR:
gam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
GII34_13420
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
GII34_13420
Ribosome biogenesis [BR:
gam03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GII34_13420
23S rRNA modification factors
GII34_13420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_23
Methyltransf_25
Methyltransf_11
S4_2
Motif
Other DBs
NCBI-ProteinID:
QHN22398
LinkDB
All DBs
Position
complement(3014900..3015811)
Genome browser
AA seq
303 aa
AA seq
DB search
MAARARLDAELVRRGLARSREQAREFIEAGTVKVNGVVAAKPATNVARDTPIVVVDAPSD
DWASRGAHKLVGALDAFADSGLTVAGRRCLDAGASTGGFTDVLLRRDARQVVAVDVGYGQ
LIWRLQNDERVDVHDRTNVRSLSPDQIGGRVDLVVADLSFISLSLVLAALADCVEPGGDL
LPMVKPQFQVGKDRVGAGGVVRDPALRIEAVAEVAGDAAALGLETRGVVASPLPGPAGNV
EYFIWLHKPETRPSEPADSESTRSTYMSSATDKVDDRSAPVSALPVEPEIMAMITAAVEA
GPR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgtgcccgactggacgccgaactcgtgcgccgcggcctggcccgctcgcgc
gagcaggcgcgtgagttcatcgaggccggcacggtcaaggtcaacggggtggtcgcggcc
aaacccgccaccaatgtcgcccgggacaccccgatcgtcgtcgtcgacgcgccgtccgac
gattgggcctcccgcggagcgcacaaactggtcggggccctcgacgcgttcgcggactcg
gggctgaccgtagccggccggcgctgtctcgatgccggggcctcgacgggcggcttcacc
gatgtgctgttgcggcgtgacgcccgtcaggtggtggccgtggacgtcggctacggccag
ctcatctggcggctgcagaacgacgagcgggtggacgtgcacgacagaaccaacgtgcgc
agtctgtcgcccgaccagatcggtggccgcgtcgacctggtggtggccgacctgtcgttc
atctccctgtcgctggtgctcgcggccctcgccgactgcgtcgaaccgggcggtgacctg
ttgccgatggtcaaaccgcagttccaggtggggaaggaccgggtcggtgccggtggtgtg
gtgcgcgatcccgccctgcggatcgaggcggtcgcggaggttgccggtgacgccgcggcg
ctcggactcgagaccaggggcgtcgttgccagcccgttgcccggacccgcggggaatgtc
gagtacttcatctggctgcacaaaccggagacccgcccatctgagccggccgattcggag
tcaacccgctccacgtacatgtcgtcggcgacagataaggtcgatgaccggagcgctccg
gtgagcgcgctgcccgtcgagcctgagatcatggccatgatcacggccgcggtcgaagcc
ggtcctcgctga
DBGET
integrated database retrieval system
