Gordonia amarae: GII34_13730
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Entry
GII34_13730 CDS
T07320
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gam
Gordonia amarae
Pathway
gam03030
DNA replication
gam03410
Base excision repair
gam03420
Nucleotide excision repair
gam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII34_13730 (polA)
03410 Base excision repair
GII34_13730 (polA)
03420 Nucleotide excision repair
GII34_13730 (polA)
03440 Homologous recombination
GII34_13730 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gam03032
]
GII34_13730 (polA)
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_13730 (polA)
Enzymes [BR:
gam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GII34_13730 (polA)
DNA replication proteins [BR:
gam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GII34_13730 (polA)
DNA repair and recombination proteins [BR:
gam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GII34_13730 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII34_13730 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QHN22444
LinkDB
All DBs
Position
complement(3102364..3105114)
Genome browser
AA seq
916 aa
AA seq
DB search
MSPAKSAAPAQSPSARARSGKPVLMLLDGHSLAYRAFFALPAENFKTATGQTTNAVYGFT
SMLINLLRDEEPTHIAAAFDVSRKTFRSELFPEYKAQRSKSPEEFGGQVELTKDVLGAMG
IPVMAIDGYEADDIIATLATQAEERGFDVLVVTGDRDSLQLVDDAVTVLYPKRGVSELTR
FTPEEVEKKYGVTPTQYPDIAALRGDSSDNLPGVPGVGDKTAAKWIRQYGSLSELVDHVD
EIKGKVGDSLRANLASVQTNRHLTQLVRDMQLPAGPDELALVGWDRERIHALFDDLEFRV
LRDRLFSTLSSVEPEAESGFDLDGSILGEGEVAGWLDAHARTGRTGISVSAPRRVVDADP
SGIAIAAADGSSAYIAIPTIAQADEEALAHWLADGELTKACHDAKWAIHALRVRGWTLRG
VTSDTALAAYLVRPGQRSFDLDDLSLRYLRRELKADGPEGDGQLSLLDAEGEDEAKAFEH
QMLEARAVAELADALDTELDRIDSRSLLTDMELPLTFVLADLEAAGIAVDINHFRELEQQ
FADRVRTAADAAYEVIGEQINLGSPKQLQAVLFEKLDMPKTKKTKTGYTTDADALQGLYE
KTEHPFLAHLLEHRDATRLRVTVEGLLKSVADDDRIHTTFNQTVAATGRLSSTDPNLQNI
PVRTEAGRQIRHGFVVGGAASGPGFETLMTADYSQIEMRIMAHLSGDEGLIEAFNTGEDL
HNFVGSRAFGVPIDEVTTEMRHRVKAMSYGLAYGLSAFGLAAQLKISREEAKAQMDQYFA
RFGGVRDYLHHVVDEARTNEYTATLFGRRRYLPDLNSDNWQRRQSAERMALNAPIQGTAA
DIIKVAMINVHKRIAAEGLSSRMLLQVHDELVVEVAAGERDAVEKLVREEMGSAITLSVP
LEVSVGFGRSWDDAAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcccgccaagagtgccgcacccgcccagagtccgtccgcccgcgccaggtcgggg
aaaccggttctgatgttgctcgacggtcattcgctggcctaccgggcctttttcgcgttg
ccggccgagaacttcaagacggccacgggacagaccaccaacgccgtctacggcttcacc
tcgatgctcatcaacctgctgcgtgatgaggaacccacccacatcgccgccgcttttgac
gtctcgcgcaagacgttccgttccgaactgttccccgagtacaaggcgcagcggtccaag
tcgccggaggaattcggcgggcaggtcgagctgaccaaggacgtgctcggtgcgatgggg
atcccggtcatggccatcgacggctacgaggccgacgacatcatcgccactctcgccacc
caggcggaggaacgcggcttcgatgtcctggtcgtcaccggcgaccgggactcgctgcag
ctcgtcgacgacgcggtcaccgtgctctaccccaaacggggggtctcggaactgacccgc
ttcaccccggaggaggtggagaagaagtacggcgtcaccccgacccagtacccggatatc
gcggcactgcgcggagacagcagcgacaatctgcccggtgtgcccggtgtcggcgacaag
accgccgccaagtggatccgtcagtacggttcgctgtccgagctcgtcgaccacgtcgac
gagatcaagggcaaggtgggggattcgctgcgcgccaatctcgcctcggtacagaccaat
cgtcatctgacgcaactggtccgcgatatgcagttgcccgccggtcccgacgagctggcg
ctggtgggctgggaccgggaacgcatccacgcactcttcgacgacctcgagttccgggtg
ctccgcgaccggctcttcagcacgctgtcatcggtcgagccggaggccgagtcgggattc
gacctcgacgggtcgattctcggcgagggtgaggtcgccggctggctcgacgcccatgcc
cgcaccggtcgcaccggtatctcggtgtcggcgccccggcgcgtggtcgacgccgacccg
tccggaatcgcgatcgcggcggccgacggttcgtcggcatatatcgcgatcccgacgatc
gcgcaggccgacgaggaggcgctcgcccactggctcgccgacggggagctgaccaaggcg
tgccacgacgcgaagtgggcgatccacgcgctgcgggtgcggggctggacgctgcgcggc
gtcaccagcgacaccgcgctcgccgcctacctggtgcgtcccggtcagcgcagcttcgat
ctcgatgacctgtcgctgcgctatctgcgccgcgagctcaaggccgacggcccggaggga
gacgggcagctgtcgctgctcgacgccgaaggggaagacgaggccaaggcgttcgaacat
cagatgctcgaggcgcgtgcggtggccgaactggccgacgcgctcgacaccgaactcgac
cggatcgattcgcggtcactgctcaccgacatggaattgccgctgacgtttgtgctcgcc
gatctggaggcggccggaatcgcggtggatatcaaccatttccgggagctggagcagcag
ttcgccgaccgggtccgcaccgccgccgacgccgcctacgaggtgatcggggagcagatc
aacctgggctcgcccaaacagctgcaggcggtgctgttcgagaagctcgacatgcccaag
accaagaagaccaagacgggctacaccaccgacgccgacgcgctgcaggggctgtacgag
aagaccgagcacccgttcctcgcgcacctgctcgaacaccgcgacgccacccggctgcgt
gtcaccgtcgagggcctgctcaaatcggtcgccgacgacgaccgcatccacaccaccttc
aaccagacggtcgccgcgaccggacggttgtcgtcgaccgatcccaacctgcagaacatc
ccggtccgcaccgaggcgggcaggcagatccggcacggattcgtggtcggcggtgcggcc
tcagggccggggttcgagacactgatgaccgccgactacagccagatcgagatgcggatc
atggcgcatctgtcgggcgacgagggcctgatcgaggccttcaacaccggcgaggatctg
cacaacttcgtcggctcgcgtgcgttcggggtgccgatcgacgaggtgacgaccgagatg
cggcaccgtgtcaaggccatgtcgtacggacttgcatacggcctcagtgctttcggtctc
gccgcgcagctcaagatcagccgcgaggaggccaaggcgcagatggatcagtacttcgcc
cggttcggcggggtccgggactatctgcatcatgtggtcgacgaggcccgcaccaatgag
tacacggcaacgctgttcggccgccgccggtacctgcccgacctcaacagcgacaattgg
cagcgcaggcagtccgccgaacgtatggccctcaatgcgcccatccagggcaccgccgcc
gacatcatcaaggtcgcgatgatcaatgtccacaaacgtattgcggccgaaggtctgtcg
tcgcggatgttgctgcaggtgcacgacgaactcgtcgtggaggtcgccgccggtgagcgc
gacgccgtcgagaagctggtgcgcgaggagatggggtcggccatcaccctgtcggtgccg
ctggaggtgtcggtgggcttcggccgctcctgggacgacgcggcccactga
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