Gordonia amarae: GII34_14320
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Entry
GII34_14320 CDS
T07320
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gam
Gordonia amarae
Pathway
gam00470
D-Amino acid metabolism
gam00550
Peptidoglycan biosynthesis
gam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GII34_14320 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GII34_14320 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gam01011
]
GII34_14320 (murD)
Enzymes [BR:
gam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GII34_14320 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gam01011
]
Precursor biosynthesis
Amino acid ligase
GII34_14320 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
Thi4
NAD_binding_8
KR
Motif
Other DBs
NCBI-ProteinID:
QHN22545
LinkDB
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Position
complement(3235062..3236618)
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AA seq
518 aa
AA seq
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MRETGIAELTAGEVVVGGAGVAGSSAARHLLAAGVPVVVADTRFGAGQTTEVPVAAELRA
AGARCVGIDDLLADPEWTARTGLVVVSPGFAPTHPLVVAAGDAGLPVWGEVELAWRIDHD
GWFGAPRTWLVVTGTNGKTTTTSMLEAIVSAAGRAAAACGNIGLPVLDALAAQPRAEVLC
AELSSFQLHWAPSIVPDAGVVLNVAEDHLDWHGSFAAYRDAKATALRGRVGVVGLDDAVA
AAIGTGPGTRRVGFTLGGPGEGELGIDDGELIDRAFGGGTLLPAAQVRPVGPSGWSDALA
AAALALAIGVRAESVTAGLARFTPAAHRGEVVETIDGVEFVDDSKATNPHAARAAIAARQ
RVVLIAGGLLKGASVDDLLTEMRERLAGVVAIGTDREIILDSIARHAPDVPAVTVFTGDD
GAVNVQRLIDGAPAPVTLGSGQSDDGTGSADLVMRHAVREAATLAATANAEPGATPVDAV
LLAPAAASLDMFAGYGRRGDSFADAARLLRGTDVSASR
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggagacgggaatcgcggagctgaccgccggggaggtcgtcgtcggcggggcgggt
gtggccggttcgtcggccgcccgtcacctgctggccgcgggtgtgccggtggtcgtcgcc
gacacccggttcggggccggccagaccaccgaggtcccggtggccgcggagctgcgggcg
gcgggcgcgcggtgcgtcggtatcgacgacctgctcgccgacccggagtggaccgcacgg
accggcctggtggtcgtgtcgccgggattcgcgcccacccatccgctggtggtggccgcc
ggtgacgccgggctgccggtgtggggcgaggtggaactggcgtggcggatcgaccacgac
ggctggttcggggcgccccgcacctggctggtggtgaccggcaccaacggcaagaccacc
accacctcgatgctcgaggccatcgtgtcggccgccggccgggccgccgcggcctgcggg
aacatcggcctgccggtgctcgacgcgctcgccgcgcagccgcgggccgaggtcctgtgc
gccgaactgtcgtcgttccagctgcactgggcgccgtcgatcgtgccggatgcgggcgtg
gtcctcaacgtcgccgaggatcacctcgactggcacggttcgttcgccgcctaccgtgac
gccaaggcgaccgccctgcgcggacgggtcggcgtagtcggcctcgacgacgcggtggcc
gcggcgatcgggaccggccccggcacccgccgtgtcggcttcacgctcggcgggcccggc
gagggcgagctgggcatcgacgacggtgaactgatcgaccgcgccttcggcggcggaacg
ttgttgcctgccgcccaggtgcggccggtgggtccgtcggggtggtcggacgcgctcgcg
gcggccgcgctggcgctggccatcggggtgcgagcggagtcggtcacggccggcctggcc
cggttcacgccggccgcacatcgcggtgaggtggtggagacgatcgacggtgtcgagttc
gtcgacgattcgaaggccaccaacccgcacgcggcccgggcggcgatcgcggcccggcag
cgggtggtgctgatcgccggtgggctgctcaagggtgcgtccgtcgacgatctgctcacc
gagatgcgggaacggctcgccggtgtggtggccatcggcaccgatcgcgaaatcatcctt
gattcgatcgcacgacacgccccagatgtcccagctgtcacagtgttcacaggtgacgat
ggagcggtgaatgtgcagcgactcatcgacggtgccccggcgcccgtgaccctcggctcc
gggcagagcgacgacgggaccggatcggcggacctggtgatgcggcatgcggtgcgggag
gccgcgaccctcgcggccaccgcgaacgcggagcccggcgccacgccggtcgacgcggtc
ctgctcgccccggccgcggcctcgctcgatatgttcgccggctacggccgtcgcggtgat
tcgttcgccgacgcggcgcggttgctgcggggtacggacgtatcggcttcgcgatga
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