Gordonia amarae: GII34_14490
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Entry
GII34_14490 CDS
T07320
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gam
Gordonia amarae
Pathway
gam03030
DNA replication
gam03430
Mismatch repair
gam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII34_14490
03430 Mismatch repair
GII34_14490
03440 Homologous recombination
GII34_14490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gam03032
]
GII34_14490
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_14490
Enzymes [BR:
gam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GII34_14490
DNA replication proteins [BR:
gam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GII34_14490
DNA repair and recombination proteins [BR:
gam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GII34_14490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
NSP2_gammaCoV
Motif
Other DBs
NCBI-ProteinID:
QHN22575
LinkDB
All DBs
Position
3273848..3275602
Genome browser
AA seq
584 aa
AA seq
DB search
MRTSVRSVHEQLSFADVDGGAALFGEVPSRYDDISLFDATLVVVDLETTGGSPVDDRITE
IGAVKVRGGEVIGEFATLVDPGMPIPPQIVSLTGITEAMVHDAPRDSEAFLSFLEFARGS
ILVAHNARFDMGFLRRCAERLHVRWPFPAPLCTVTLARRILSRDEAPSVRLSALAELFDV
TVRPTHRALDDARATVEVLHRLLERVGNQGVRTVRELASYRSESASRLAAKRHLGESLPT
RPGVYLFRGPTDEVLYVGTAVNLRRRVMSYFSGTDPRRRMSEMVRLATRVDHVECAHGLE
AGVRELRLLAAHAPAYNRRSTQPRRGWWLVLSTERFPRLKVSRSPTDQSVGPFSDRMVAA
SVGDLISVGAGLRTCATTGRGATHHWCRPDSSGRMIGGCRAASPVPVTLTEYAGRVMKAR
AVMLGDCGDIVERAIAEVSRLATAEMFESAARQRDRTAAMIDTLARCQRLRALCVVAELV
VARPHDGGGWELGVIRHGQLASAGLARRGVPPMPVVEALVAGAQTVNPGVGPLCGAPPEE
AALIYRWITEPGARIVSASQPLTLPAHGAARRLDWSRLAREARR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaactagtgtgcgatccgtgcacgagcagttgagttttgccgatgtcgacggaggc
gccgctcttttcggcgaggtgccctcgcggtacgacgacatctccctgttcgacgcgacc
ctggtggtcgtcgatctggagaccaccggcggcagcccggtggacgacaggatcaccgaa
atcggggcggtcaaggtccggggcggcgaggtgatcggcgagttcgcgacactcgtcgac
ccggggatgccgatcccgccgcagatcgtctcgctcaccgggatcaccgaggcgatggtg
cacgacgcaccacgcgacagcgaggccttcctgtcgttcctggagttcgcccgtggctcg
atcctggtcgcccacaacgcccggttcgacatgggattcctgcgccgctgcgccgagcgc
ctgcacgtccgctggccgttcccggctcccctgtgcaccgtgacgctggcacgccgcatc
ctgagccgcgacgaggccccttccgtgcggctgtcggcgctggccgagcttttcgacgtc
acggtgcgccccactcaccgcgcgctcgacgatgctcgtgccacggtcgaggtgctgcac
cggctgctcgagcgggtcggcaaccagggcgtgcggacagtccgggagctggcctcctac
cgttcggaatccgcgtcgcggctggccgccaaacgtcatctcggcgaatccctgccaacc
cgtcccggcgtgtacctgttccgtgggccgaccgacgaggtcctctatgtcggcaccgcg
gtgaatctgcgcaggcgcgtcatgtcttacttctccggcaccgatccgcgtcggcggatg
agcgagatggtgcggttggcgacgcgcgtcgatcacgtggaatgtgcgcatgggctggag
gcgggcgtgcgtgaactccggctgctggccgcccacgcgcccgcctacaaccgtcgctcg
acacagcccaggcgcggctggtggctggtgctgtccaccgagcgctttccccggctgaag
gtgtcccgctcccccaccgaccagtcggtgggcccgttctccgaccgcatggtggccgcg
tcggtcggagacctgatctcggtgggtgcggggctgcggacatgtgcgaccacgggtcgc
ggggccacacaccattggtgccggcccgactcgtcggggcggatgatcggcgggtgccgg
gccgcgtcgccggtcccggtgacgctgacggagtacgcgggccgggtcatgaaggcgcgc
gccgtgatgctcggcgactgcggcgacatcgtcgaacgcgccatcgcggaggtgtcgcgg
ctggccacggctgagatgttcgaatccgcggcccggcagcgggacaggaccgccgcgatg
atcgacacgctcgcccggtgccagcggctgcgggcgctgtgcgtcgtggccgagctcgtc
gtcgcccggccgcacgacggcggcggctgggagctcggggtgatccggcacggccaactg
gccagtgcgggcctggcacgccgcggggtacctcccatgccggtggtggaggcgctggtg
gccggtgcacagaccgtcaacccgggggtggggccgctatgcggggcaccgcccgaggaa
gccgcgctgatctatcggtggatcaccgagcccggcgcgcgcatcgtgtccgcgtcgcag
ccgctcaccctccccgcccacggcgcggcccggaggctggactggtcacgactggcccgc
gaggcacgacggtag
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