KEGG   Gordonia amarae: GII34_15110
Entry
GII34_15110       CDS       T07320                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
gam  Gordonia amarae
Pathway
gam00061  Fatty acid biosynthesis
gam00071  Fatty acid degradation
gam01100  Metabolic pathways
gam01212  Fatty acid metabolism
gam02024  Quorum sensing
gam04146  Peroxisome
Module
gam_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:gam00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GII34_15110
   00071 Fatty acid degradation
    GII34_15110
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GII34_15110
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GII34_15110
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:gam01004]
    GII34_15110
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gam04147]
    GII34_15110
Enzymes [BR:gam01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GII34_15110
Lipid biosynthesis proteins [BR:gam01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GII34_15110
Exosome [BR:gam04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GII34_15110
  Exosomal proteins of breast cancer cells
   GII34_15110
SSDB
Motif
Pfam: AMP-binding AMP-binding_C DUF7270 AMP-binding_C_2
Other DBs
NCBI-ProteinID: QHN22678
LinkDB
Position
3406478..3407986
AA seq 502 aa
MANPVAALWRNAEESPDLVAVRDGERTLSYSGLRDRIACRAREFSALGVKPGDRVLFIAP
SVPEFVVTYYALHTVGATVITMNVMSTVPEIDYVVDDSGLTTIVAWHASAEAAEHVARAR
ELPFVEVGAFENDPDTPAADAVAAGYVERDEDDEAVILYTSGTTGKPKGAALTVSNLNSV
PTSFHSALALEAGERWATALPLFHCFGQAVVMHNALTWKGTLSLLSPFAPDVFMDRLRDE
HITIACGVPTMWNAMLQAAGDRQASDFADLRLACSGGASLPGEVLREFSERFGCTILEGY
GLTETAGATTFSDLNEGPKVGTIGKPLPGYTVEIRDPDGNVLPAEAVGEVFILGPSVMKG
YWNRPDATASTLQDGWLATGDLGSTDPDGNIRIVDRKKDLIIRGGYNVYPKEVEEVLYTH
PDIVEVAVIGVPDDHYGEEIAAAVALRPGATGDRDTLRAWCKERLSAYKVPRIIVFVDAL
PKGSTGKILKRAIDIDALTSAT
NT seq 1509 nt   +upstreamnt  +downstreamnt
gtggccaatcctgttgccgcactgtggcgtaacgccgaagaaagccccgacctggtcgcc
gtccgcgacggtgagcgcacgctcagctactccggtctccgcgaccggatcgcctgccgc
gcccgcgagttctcggcgctgggcgtcaagcccggcgaccgggtcctgttcatcgccccc
tccgtgcccgagttcgtggtcacctattacgcgctgcacaccgtgggagccaccgtcatc
accatgaacgtgatgtcgacggtgcccgagatcgactacgtcgtcgacgattcgggactg
acgacgatcgtcgcgtggcacgcgagcgccgaggcggctgagcatgtcgcgcgggcccgt
gagctgccgttcgtcgaggtcggcgcgttcgagaacgatcccgacacgcccgccgccgac
gcggtggccgcgggctacgtcgagcgggacgaggacgacgaggcggtcatcctctacacc
tccggcaccaccggcaaacccaagggcgccgcgctgaccgtcagcaacctgaactcggtg
ccgacctcgttccactcggcgctggcgctcgaggcgggtgagcggtgggccaccgcgctg
ccgctgttccactgcttcggtcaggccgtggtgatgcacaacgcgctcacctggaagggc
accctgtcgctgctgtccccgttcgcccccgacgtgttcatggaccgcttgcgcgacgag
cacatcaccatcgcgtgcggtgtgcccaccatgtggaacgcgatgctgcaggccgccggt
gaccggcaggcgagcgatttcgcggatctgcgcctggcctgttcgggtggcgcgtccctg
ccgggtgaggtgctgcgtgagttctccgagcggttcgggtgcacgatcctcgaagggtac
gggctcaccgagaccgccggagccaccacgttcagcgacctgaacgagggccccaaggtc
ggcaccatcggcaaaccgctgcccggctacaccgtcgagatccgcgaccccgacggcaac
gtgctgcccgccgaggccgtcggtgaggtgttcatcctcgggccgtcggtgatgaagggc
tactggaaccggcccgacgccaccgcgtcgacgctccaggacggctggctcgccaccgga
gacctcggatccaccgaccccgacggcaatatccggatcgtcgaccgcaagaaggacctg
atcatccgcggcgggtacaacgtgtaccccaaggaggtcgaggaggtcctgtacacccac
cccgacatcgtcgaggtcgcggtcatcggtgtgcccgacgatcactacggtgaggagatc
gccgcagccgtcgccctgcgccccggcgccaccggtgacagggataccttgcgcgcctgg
tgtaaggaacggctcagcgcctacaaggtcccgcgcatcatcgtgttcgtcgacgccctc
cccaagggttcgacaggcaagatcctcaagcgcgccatcgacatcgacgccctcacctcc
gccacctga

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