Gordonia amarae: GII34_17510
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Entry
GII34_17510 CDS
T07320
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gam
Gordonia amarae
Pathway
gam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GII34_17510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gam03021
]
GII34_17510
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_17510
Enzymes [BR:
gam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GII34_17510
Transcription machinery [BR:
gam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GII34_17510
DNA repair and recombination proteins [BR:
gam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GII34_17510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QHN23078
LinkDB
All DBs
Position
complement(3930349..3931401)
Genome browser
AA seq
350 aa
AA seq
DB search
MLISQRPTLTEEIVADNRSKFFIEPLEPGFGYTLGNSLRRTLLSSIPGAAITSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTGADIVPPAGVTVHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIQSFSLPIEELELTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHALGLSLKDSPASFDPSQVAGYDPATGTWSDDATFSDDSGEDFAETEQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctcacagcgacccaccctcaccgaggagatcgtcgccgacaaccggtcgaag
ttcttcatcgaaccgctcgaacccggcttcggctacaccctcggtaactcgctgcgccgt
accctgctctcgtcgatcccgggcgctgccatcaccagcatccgcatcgacggtgtcctg
cacgagttcaccaccgtccccggcgtgaaggaggatgtcaccgacatcatcctgaacctc
aagggtctcgtggtcagctccgaagaggacgagccggtcaccatgtacgtgcgcaagcag
ggtccgggcaccgtcaccggcgccgacatcgtgcctccggccggtgtcaccgtgcacaac
cccgatctgcacatcgccaccctcaatgacaagggcaagctcgagatcgagcttgtcgtc
gagcgtggtcgcggttacgtacccgcggtgcagaacaaggcgtcgggtgccgagatcggc
cggatcccggtcgactcgatctactcgccggtgctgaaggtcacctacaaggtcgaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctcgtgctcgacgtcgagaccaagaac
tcgatcagcgcacgcgatgcgctggcgtcagcgggcaagaccctcgtcgagctgttcggg
cttgcccgggagctcaacgtggaggccgagggcattgagatcgggccgtcgccggccgag
gccgaccacattcagtcgttcagcctgccgatcgaggagctcgagctcaccgtccggtcg
tacaactgcctcaagcgcgaaggtgtccacaccgtcggcgagttggttgcccgcaccgag
tcggatctgctcgacatccgcaacttcggccagaagtcgatcgacgaggtgaaggtcaag
ctgcacgccctgggtctgtctctcaaggacagcccggcgagcttcgacccgtcgcaggtc
gccggttacgacccggccaccggcacctggtcggacgacgccacgttcagcgacgacagc
ggcgaggatttcgcggagaccgaacagctctga
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