KEGG   Gordonia amarae: GII34_17660
Entry
GII34_17660       CDS       T07320                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
gam  Gordonia amarae
Brite
KEGG Orthology (KO) [BR:gam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gam02048]
    GII34_17660
Enzymes [BR:gam01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GII34_17660
Prokaryotic defense system [BR:gam02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    GII34_17660
SSDB
Motif
Pfam: Cas3-like_C_2 Helicase_C Cas3_HD DEAD HD
Other DBs
NCBI-ProteinID: QHN23106
LinkDB
Position
3954809..3957217
AA seq 802 aa
MAQHSSYGDLFRAAMNGQDPYPYQCDVASGTHLPALIDVPPGLGKTAAVVVGWLWFRLFH
PSAEVRESTPRRLVITLPMRTLTRQTYTVVRDILDELQLDVGLGLLTGESGDRKTRPWRL
EPHRNVILIGITDIVTSSAMSRSYGSSRSCFPIDAGLIWNDSHIVLDEVQLIPNATATLR
QISAFQTQHGASRFGLTCMSATVTRALLSTVDNPFPSADETVRIAEGDQPESLLRRLHSA
RTIIRLDADTKNAKDFAAEILRLHRPGTLTLVVINTVDRATEIYVKATTLAPTTGPAITL
LHSRFRPYERDSYIDRIGTEPHDDILIATQVVEAGIDLDAATLITEAAPWSSLVQRSGRC
NRAGWRTDATVYWVVPPSAAPYEDDDVDATVAALTAVDGESVTNAELLAIPANEAIPLVP
VLRESDFEALFDTAPDLSGNDFDVSPYIRDSDDMDAQLTWVDLESAPPTPDTKIPDPQFR
CRVPLKKVLDVATRATKRKTIWSYAHSERKWVQISKIRPPRPGEILLVDKSAGLYDPHKG
FDPKSDKPVTIPEPDDASSREYRLIDSAVTSDSSDADGGSIDHSQWLSLDQHLTETQAQA
RVLVENLPLESALRDDVVLSAYLHDLGKAHSTWQNALQATGEPPDRNIAWAKSPGTSRLV
YEGDITSFRHELASVAILDAEMSHLLDKAHDRDLVRYLIAAHHGKIRMKVRDLDGAATGT
VFGIAEGSADVFPVLDEPAQQVSLTTDQFRTVNPGGQGWVEMTADLIERYGLCRLSYLEM
LVRVADWRASSRRFQIPEGAAQ
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggcgcagcactcaagctacggcgatctgtttcgggcggccatgaatggccaagacccg
tacccgtaccagtgtgacgtcgcctcaggaacgcatctgcctgcactgatcgacgtccca
cccggcctcggcaagaccgcggctgtggttgtcgggtggctctggttccgtctcttccat
cccagcgctgaggtacgggaatctacgccgcggcgcctggtcatcaccttgccgatgcgc
actttgacccgacagacgtacaccgttgtccgtgacatccttgatgagcttcaactcgat
gtcgggctcggactgctcaccggtgagtccggggaccggaaaaccaggccgtggcggctg
gaacctcaccgcaatgtcattctcatcggaatcacggatatcgtcaccagcagcgcaatg
tcgaggtcgtacgggtcctcgcggtcgtgcttcccgatcgacgccggtctcatctggaat
gacagccatatcgtgctcgatgaagtgcaactcatacccaatgcgacggcgaccctccgc
cagatatccgcattccagacgcagcacggcgccagcagattcgggttgacatgcatgagc
gcaaccgtgaccagagcacttctcagtacagtcgacaatccgttcccatccgccgacgag
accgtccggatcgcagaaggtgaccagcccgaatcgctcctgcgcagactgcacagtgca
cggacgatcatcaggctcgatgcggacaccaagaacgcgaaggactttgcagcggagata
ctccggcttcacaggcccggaacgctcaccctcgttgtcatcaacacggtcgaccgtgca
accgaaatctacgtgaaggcaaccacactcgcaccaactaccgggcctgcgataacgctc
ctgcactcccggttccgcccgtacgagcgggacagctacatcgaccgtatcggcaccgag
cctcacgacgacatcctcatcgccacccaggtcgtcgaggcaggtatcgacctggacgct
gccaccctgatcaccgaggccgcaccgtggtcatcgttggtacaacgttcgggcaggtgc
aatcgagcaggatggcgcaccgacgccacagtgtactgggtggttcctccgtccgccgca
ccgtatgaggacgacgatgtcgatgcgacggtggccgcgctgacggcagtcgacggcgaa
tcggtaaccaacgccgaactgctggcaataccggccaacgaagcgattccgctcgtacca
gttctgcgagaaagcgacttcgaggcgctgttcgacacagctcctgacctgagcggcaac
gacttcgacgtcagtccgtacatccgggattccgacgacatggacgcccaactcacatgg
gtcgaccttgaatcagcgccgcccacacccgacacaaagatcccggacccgcaattccgc
tgccgcgtgccgctgaagaaggtcttggacgttgcgacccgagccacaaagaggaagacg
atctggtcctacgcgcattccgaacggaaatgggtgcagatcagcaagatccgtccgcct
cgtcctggcgagatcctacttgtggacaaatccgcaggtctgtacgacccgcacaagggc
ttcgacccgaagtctgacaagccggtgaccatccccgagcccgatgacgcgtcgtcacgt
gagtaccgcctcatcgacagcgccgtgacgtcggacagctccgacgcggacggcggatcg
atcgaccactcccagtggctgtcactcgaccaacatctcaccgagacgcaggcacaagca
cgcgtgctcgtcgagaaccttccgctggagtccgcactcagggacgacgtagtcctctcg
gcgtacctacacgacctgggtaaagcccattccacgtggcagaatgcgctgcaggccacc
ggagagccaccggaccggaacatcgcgtgggccaagtcccccggtacgtcccggctcgtc
tacgaaggtgatattacgagcttccgccacgaactggcctcggtcgcgatcctcgatgcc
gagatgtcacatctcctcgataaggcacacgaccgcgatctggttcgctacctcatcgcc
gcgcaccacggtaaaatccgcatgaaagtccgcgacctcgacggcgccgcgaccggcacc
gtgttcggaatcgccgaaggtagtgccgatgtattccccgtcctggatgagccggcgcag
caggtgtcactgacaaccgatcagttccgaactgtcaacccaggcgggcaaggctgggtc
gagatgaccgccgacctcatcgagcgatacggtctgtgccgcctgtcatatctcgaaatg
cttgtgcgtgttgctgactggcgcgcaagcagcagacgattccagatacctgagggggca
gcgcaatga

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