Gordonia amarae: GII34_18650
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Entry
GII34_18650 CDS
T07320
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gam
Gordonia amarae
Pathway
gam00061
Fatty acid biosynthesis
gam00071
Fatty acid degradation
gam01100
Metabolic pathways
gam01212
Fatty acid metabolism
gam02024
Quorum sensing
gam04146
Peroxisome
Module
gam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GII34_18650
00071 Fatty acid degradation
GII34_18650
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GII34_18650
09145 Cellular community - prokaryotes
02024 Quorum sensing
GII34_18650
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gam01004
]
GII34_18650
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gam04147
]
GII34_18650
Enzymes [BR:
gam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GII34_18650
Lipid biosynthesis proteins [BR:
gam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GII34_18650
Exosome [BR:
gam04147
]
Exosomal proteins
Exosomal proteins of breast milk
GII34_18650
Exosomal proteins of breast cancer cells
GII34_18650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
THDPS_M
Herpes_UL37_1
GH3
Motif
Other DBs
NCBI-ProteinID:
QHN23289
LinkDB
All DBs
Position
complement(4274659..4276443)
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AA seq
594 aa
AA seq
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MTLTPDVMAGIRSALRELWSAPDDARMIEQAGHWHSWSEVRGLAEQITAELDRIGAGPGS
RIGVVLSNSMQSVASLVAILGTGRTLVTLNPMQPAARVARDLLGSAPDVALAPTESWSAD
EFRSAVDELGIPGFSFAQAGAGPHRTLRDASPSGSAPQGSRSVSSSGASAPRGSGSVSSS
GGVGPGGSGSVSSSGGVGPRGSSCTARPHFLIPEADATKERGSRRVRRDEAPDSTTTAAS
GTAIEMFTSGTTGAPKRIPLTWRQLDSTLAAVHSRIAQPEQRPAPLTGRVALVTLSMVHI
GGMWAVLQALSEARPFVLLERFTVDGWTSAIEEHQPRIASLPPAAMRSVLNADVPAERLR
SLRAVTAGTTFVSPDLADEFIGRYGIPVLIVYGATEFSGAVAGWTKPMHHEWWTRKRGSV
GRPFPGVSMRTVDDAGNILPTGETGRLEVLSGQTTSGADGWVRTSDLAHLDEDGFLYIDG
RADDAIVRGGFKVQPEVVADALRAHEAILDATVYGRADDRLGQVPVAVVEWAPGAAPVGE
ADLKECLRARLTAYEIPVTIHGVDKLPRSASLKVDRRRLLDLVADIEAAQENQE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
gtgacactgacccccgacgtgatggccggaatccggtccgcgctgcgcgagctgtggtcc
gcgcccgacgacgcccgcatgatcgagcaggccggccactggcacagctggagcgaggtg
cgtgggctcgccgaacagatcaccgccgaactcgacaggataggagccggccccggctcc
cggatcggtgtggtgctcagcaacagcatgcagtcggtggcctcgctggtggcgatcctg
ggtaccggccgcaccctcgtcaccctcaacccgatgcagcccgcagcccgcgtcgcccgc
gacctgctgggcagtgcccccgacgtcgccctcgccccgaccgagtcctggtctgccgac
gagttccgttccgcggtagatgaactcggcatccccggcttctccttcgctcaagcgggt
gccgggcctcaccggacccttcgagacgcctcgcctagcggctcggctcctcagggatca
agaagcgtgtcgagttctggcgcctcggctcctcgggggtcaggcagtgtgtcgagttct
ggcggcgtgggtcctggggggtcaggcagtgtgtcgagttctggcggcgtgggtcctcgg
gggtcgagttgcacggcgcgaccacacttcttgatccctgaggccgatgcgacgaaggag
cgagggtcacgaagggtccggcgagacgaggcacctgacagcaccaccaccgcggcctcc
ggaacagccatcgagatgttcacctccggaaccaccggggcacccaaacgcatccccctg
acctggcgtcaactcgactcgaccctcgccgcggtgcactctcgcatcgcccagccggag
caacgccccgcacccctgaccggccgggtggcgctggtgacgctgtcgatggtgcacatc
ggcggcatgtgggccgtgctgcaagcactgtcggaggcccggccgttcgtactcctcgaa
cggttcaccgtcgacggctggacgtcggcgatcgaggaacatcagccacgcatcgcgagc
ctcccgcccgcggcgatgaggtcggtgctgaacgcggacgttccggccgaacgactgcgc
agcctgcgcgcggtcaccgcgggcaccaccttcgtcagccccgatctggccgacgaattc
atcggccgctacggcattcccgtgctcatcgtctacggtgccaccgagttctccggggcg
gtggccggctggaccaaaccgatgcaccacgagtggtggacccgcaaacgtggcagcgtg
ggccgcccgtttcccggggtgagcatgcggaccgtcgacgacgcgggcaacatcctgccc
accggcgaaacgggccgcctggaagtcctttcaggacagacgacttccggtgccgacggc
tgggtgcgcaccagcgacctcgcccacctcgacgaggacgggttcctgtacatcgacgga
cgcgccgacgacgccatcgtgcgaggcggtttcaaggtgcagcccgaggtggtggccgac
gcacttcgtgcccacgaggcgattctcgatgccaccgtgtacggcagggccgacgacagg
ctcggccaggtgccggtggccgtggtcgaatgggcgcccggcgccgcacctgtcggcgag
gcggacctgaaagagtgtctgcgtgcccgtctcaccgcctatgagatcccggtgaccatc
cacggtgtcgacaagctgccgcgcagtgcgtcgctgaaggtcgaccggcgcaggctgctc
gacctggtcgccgatatcgaagcagcgcaagagaaccaggagtag
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