Gordonia amarae: GII34_19260
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Entry
GII34_19260 CDS
T07320
Name
(GenBank) helicase SNF2
Organism
gam
Gordonia amarae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QHN23392
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Position
complement(4414324..4417686)
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AA seq
1120 aa
AA seq
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MPSEPLRIAPAELRRRFGGSALQRGTRYSNSGMVTEFGWTDRGELTGRCRGSGQEIYRVT
VSFNGAPSSLTVSMATCSCPVGMFCKHAVALLLVAGRAGAVQPPPVVAWRSMLSAVLDDA
SGEVPTPTMRPLALSVGIEAPTSLAVRMGNPDAALLVTPMTWGKRRGWIKGGATWSDIFR
IRQEDFPTAQTDAVIAIHRALAGSLFSHRDERVRLTYAPREIWDLLESARRAGVEIIAGP
GVQASSVRITTARLHYGLRGCADGAQLTATVEIGDGQVLAAGDVGGVLGPAGNVHGLWGV
HDDALVLAAFDPIPGAAEIAAARDGSEVLIPAADLPEFSAEVLPRLTRARTVAVHDEQLF
APPRIEGPFAVLTLTPAPAGGVRLSWSAGYTVNDTRHVFDPAETAATGFRDESAEAALWQ
EVRPELSATALMCRAWRTHATDHWRRRQVLDHSDKVLRELRLLQSADPDEEVIGATDIAG
LLVTVDLSGVEAALLVAEALPELDRHPGIVIDNRLDVEYRAADSAPAIEFASEDSEFGND
WLSLGITVTVGGTRVPVAAVISEIVSGATHMLLNDGVYFPLDSPELRKLADLLAEGRALG
EIESGMVHPASLNATFWEELLALGVVDEQLANWRDRMTALASARPPHLVDLPAELHADLR
DYQHAGFEWLTFLWDNGLGGILADDMGLGKTVQTLAIITRAVAATPDARFLVVAPTSVIA
NWAAECHRFAPGLRVATVTATRARTGMGFEQQVAGADVVVTSYTLLRLLFDEINEYSWDG
VIFDEAQFIKNHTGKTHQCARRLESGFKLAITGTPMENNLMELWSLLSVTAPGLFPSPVA
FTDYFRKPIESGSAPDRLAVLRRRIKPVMLRRTKDQVAIDLPPKQEQALVLDLAARHRKI
YDTRLARERQKVLGLLGDWEKNRFQVFRSLSLLRQLSLHASLVDESHHGVASSKVDYLTE
QLPTLVAEGHNALVFSQFTRFLHILAAHLDKVGIAYSYLDGSMNAAGRAEAVRRFTSGET
EVFLISLKAGGFGLNLTEADYCFVCDPWWNPAAEAQAVDRAHRIGQSRPVNVYRLVSAGT
IEERVVALQDRKRALFDAVVDDGELFGTAISADDIREMIG
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcggaacccttgcgtatcgcaccggccgaactgcggcggcggttcggtggtagt
gcgctccagcggggaacgcggtactccaattccggcatggtcaccgagttcggctggacc
gaccgcggtgagctgaccggccggtgccgtggctcgggccaggagatctaccgggtgacg
gtgtcgttcaacggtgccccgtcgtcgctcacggtctcgatggccacgtgctcgtgcccg
gtcgggatgttctgcaagcacgcggtggcgttgctgctggtcgccgggcgtgccggggcg
gtgcagcccccgccggtcgtggcgtggcggtcgatgctgtcggcggtgctcgacgatgcg
tccggcgaggtgcccacgcccaccatgcgtccgctcgcgctgtcggtgggaatcgaggct
ccgacgagtctcgcggtgcggatgggcaaccccgatgcggcattgctggtgacaccgatg
acctggggcaagcgtcgtggatggatcaagggcggcgccacgtggtcggacatcttccgc
atccgccaggaggacttcccgacggcccagaccgacgccgtcatcgcgattcaccgcgcg
ctggccggcagcctgttctcccaccgggatgaacgggtcaggctgacgtacgcaccccgc
gagatctgggatctgctggagtcggcgcggcgggccggggtcgagatcatcgccggcccc
ggcgtgcaggcgtcgtcggtccggatcaccaccgcccggctgcattacggcctgcggggg
tgcgccgacggcgcgcagctgaccgccacggtcgagatcggcgacggacaggtgctcgcg
gccggcgacgtcggtggcgtcctcgggcccgccgggaacgtgcacggcctgtggggcgtc
cacgacgacgcgctggttctcgcggcctttgacccgatcccgggtgcggccgagatcgcc
gccgcccgtgacggttccgaggtgctcatcccggccgcggatctgcccgagttctcggcc
gaggtgctgccccggctgacccgggcgcgcaccgtcgcggtgcacgacgagcagctgttc
gccccgccccgcatcgagggtccgttcgcggtgctgacgctgacgccggccccggccggt
ggtgtgcgtctgtcgtggagcgccggctacaccgtcaacgacacccggcatgtcttcgat
ccggcggagaccgcggccaccggctttcgcgacgagagcgcggaagccgcactgtggcag
gaggtccggccggaactgtcggcgaccgcgctgatgtgccgggcgtggcggacacacgcc
acggaccattggcggcgccggcaggtcctcgatcactcagacaaggtcctccgcgagcta
cggctgttgcagtccgccgacccggatgaggaggtcatcggggccaccgatatcgccggt
ctccttgtcaccgtggatctttccggggtcgaggcggcgctgctggtggccgaggcgctg
cccgaactcgaccggcaccccggtatcgtcatcgacaaccgcctggacgtcgagtatcgt
gccgccgacagcgcgccggccatcgaattcgcttcggaggacagtgaattcggcaatgac
tggctcagtctcggcatcactgtcacggtgggcggaacgcgtgtgcccgtcgccgcggtc
atcagcgagatcgtttccggcgcaacccacatgctgctcaacgacggtgtgtactttccg
ctcgactcacccgagctgcgcaagctggccgacctgctcgccgaggggcgggcgctcggc
gagatcgaatcgggcatggtgcacccggcatcgctcaacgccaccttctgggaggaactg
ctcgccctcggcgtcgtcgacgaacaactggcgaactggcgcgatcgtatgacggcgctg
gcctcggcccggcctccgcacctggtggacctgcccgccgaactgcacgccgacctgcgc
gactaccagcacgccggcttcgaatggctgaccttcctgtgggacaacggactcggcgga
atcctcgccgacgacatgggcctgggcaagacggtgcagacgctcgcgatcatcacccgc
gcggtcgccgcgacgccggatgcgcggttcctggtggtggcaccgacctccgtcatcgcg
aactgggccgccgaatgtcacaggttcgcccccgggctgcgggtggccaccgtgaccgcc
acccgggcccgtaccggtatggggttcgagcaacaggtggccggggccgatgtggtggtc
acctcctacaccctgctgcgcctgctgttcgacgagatcaacgaatactcctgggacgga
gtgatattcgacgaggcgcagttcatcaagaatcacaccggcaagacccaccagtgtgcg
cgccgcctggagtcggggttcaaactcgctatcaccggcaccccgatggagaacaacctg
atggaactgtggtcgctcctcagcgtcaccgcacccgggctgttcccgtcgccggtcgcg
ttcaccgactacttccgcaaacccatcgaatcgggttcggcgcctgaccggctggccgtg
ctgcggcggcggatcaagccggtcatgttgcgccgcaccaaagatcaggtggccatcgac
ctgccacccaaacaggaacaggcgttggtgctggacctggcggcgcggcaccgcaagatc
tacgacacccgactcgcccgcgaacggcagaaggtgctcggcctgctcggtgactgggag
aagaaccgcttccaggtgttccggtcgctcagcctgctgcgccagctcagcctgcacgcg
agtctggtcgacgaatcgcatcacggcgtcgcgtcgtcgaaggtcgactacctcaccgag
caactgccgacactggtcgccgaaggccacaacgcgctcgtgttcagccagttcacccgc
ttcctgcacattctcgccgcgcacctggacaaggtgggcatcgcctacagctacctcgac
ggatcgatgaacgccgccgggcgcgccgaggcggtgcggcgattcacctccggcgagacc
gaggtgttcctgatcagcctcaaggccggcggtttcggcctcaacctcaccgaggccgac
tactgcttcgtgtgtgacccgtggtggaatccggcggccgaggcgcaggccgtggaccgt
gcgcatcgcatcggccagagccggcccgtgaacgtgtaccggctggtgtcggcgggcacc
atcgaggagcgggtggtggcgttgcaggaccgcaaacgcgcactgttcgacgcggtggtg
gacgacggggagttgttcgggacagcgatcagcgccgacgacatccgcgagatgatcggc
tga
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