Gordonia amarae: GII34_21365
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Entry
GII34_21365 CDS
T07320
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gam
Gordonia amarae
Pathway
gam03030
DNA replication
gam03430
Mismatch repair
gam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII34_21365
03430 Mismatch repair
GII34_21365
03440 Homologous recombination
GII34_21365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gam03032
]
GII34_21365
03400 DNA repair and recombination proteins [BR:
gam03400
]
GII34_21365
Enzymes [BR:
gam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GII34_21365
DNA replication proteins [BR:
gam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GII34_21365
DNA repair and recombination proteins [BR:
gam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GII34_21365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
DNAX_ATPase_lid
RuvB_N
AAA_30
AAA_19
AAA_16
AAA_14
DnaX_C
AAA_18
Rad17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QHN23743
LinkDB
All DBs
Position
complement(4881372..4883864)
Genome browser
AA seq
830 aa
AA seq
DB search
MALYRTYRPATFAEVVGQEHVTDPLSRALDSGRINHAYLFSGPRGCGKTSSARILARSLN
CAQGPTSTPCGTCSSCVALRPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPSESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLENICAKEHVTVAPDVYPLVIRAGGGSPRDSLSILDQLLAGAGEDGVTYDRALAL
LGVTDVALIDNAIDGLAAGDGASVFATVERLVDAGHDPRRFAIDLLERLRDLILLQAVPE
AVDRGLVEAPGEQLDRMRHQIGVLGPATLTRFAETTHAALGEMRGTTSPRLLLEVLCARL
LLPAASSDETALLQRIEQLEAGVVTSGAAARPAAAPASAPAAAAASAPPAPTPPVTESRF
MRPSERKAMEERKAAEEAERRKAEEAEADHAAQDPAVREPVAEQPVPEQAAPDQPVALAV
AHDAESARSEAAEALVPPAARVDETPPWDPDPVATEDLASARQTPSSAETPSPAAEPEPE
PVTEPAESVVAEPVPEPAAPSGAGREARLRLVPDQENGPDHESGTAATSADDDDVPLPEE
PVDEYALPPEDAAPRSRPVRPAPEPEPEPEAEPGGLDLDAVRTRYQEFRNAVRERAKTLE
PMLSAAVVHDLQDRTVVLAHPYEALVQRLGAPHAVSVMREALQEVFGTELDVRAVHQAPG
SAPAAGASGGPRPAVKQQPKRTQTYSRPSAQNQVAASPAAGQPEPAADKQPPPPEPEPEP
EPPRADEDIPEDEQAEMVADAHSGTPDRRHDQGAAALDLLKSELGATVIE
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gtggccctgtatcgcacctatcgcccggcaacattcgccgaagtcgtcggtcaggagcat
gtcaccgacccgctcagccgcgccctcgacagcggccggatcaaccacgcctacctgttc
tccggcccgcgcggctgcggtaagacatcgtcggcgcgcatcctggcgcgctcgctgaac
tgcgcgcaaggacccacgtcgacgccgtgcggtacctgttcgtcgtgtgtggcgttgcgg
ccgggcggacccggcaaccttgacgtgatcgaactcgacgccgccagccacggcggtgtc
gacgacacccgcgagctgcgggaccgtgccttctacgcgccgtcggaatcgcggtaccgg
gtgttcatcgtcgacgaggcgcacatggtcaccaacgcgggcttcaacgcgttgctcaag
atcgtcgaggagccgccggagcatctgatcttcgtgttcgccaccaccgaaccggagaag
gtgctgcccacgatccgctcgcgcacccaccactacccgttccggctcctcgccccgccg
gtgatgcgcggtctgctggagaacatctgcgccaaggaacacgtcaccgtcgcacccgac
gtgtatccgctggtgatccgcgccggtggcggttcgccgcgtgactcgttgtcgatcctc
gaccagttgctcgccggtgcgggcgaggacggggtcacctacgaccgggccctcgcgctg
ctcggcgtcaccgatgtcgcgctcatcgacaacgccatcgacggcctcgccgcgggcgac
ggcgcgtcggtgttcgcgacggtcgaacggctcgtcgacgccgggcacgatccgcgccgg
ttcgcgatcgacctgctcgaacggctgcgggatctcattctgctgcaagctgttccggag
gccgtggaccgtggtctggtggaggcgccgggggagcagctcgaccggatgcggcaccag
atcggggtgctcgggcccgccaccctcacccggttcgccgagaccacgcacgccgcgctc
ggcgagatgcgcggcaccacctcgccgcgtctgctgctggaggtgctgtgcgcgcgactg
ttgctgcccgcggcgtcgtcggatgagacggcgctgctgcagcggatcgagcagctcgaa
gcgggtgtggtcaccagtggcgctgcggcccgtcctgccgccgcgcccgcgagcgcgcct
gccgccgcggctgcgtccgccccgcctgcgccgacaccgccggtcaccgagtcgcggttc
atgcggccgtccgaacgcaaggcgatggaggaacgcaaggcagcggaggaggccgagcgg
cgcaaagccgaagaggccgaggccgatcacgcggcgcaggatccggcggtgcgggagccg
gtggccgaacaaccggtgcccgaacaagccgcacccgatcagccggtggcgttggctgtg
gcacacgacgcagagtcggctcgctctgaggccgcagaggcgctcgtaccgcccgcggcg
cgggtcgacgagaccccgccgtgggatcccgacccggtggccacggaggatctggcgtct
gctcggcaaacaccgtcatccgcagaaacaccttctcccgcagcggaaccagaaccggaa
ccggtcaccgaacctgccgaatccgttgtcgcggagccggtaccagaacctgccgcaccg
tccggtgcgggccgggaagcccggttgcggctcgttccggaccaggaaaacggcccggat
catgaatccggcacggccgcaacgtctgccgacgacgacgacgtcccgctccccgaggag
cctgtcgacgaatacgcgctgccgccggaggatgcggcaccccggtcccggccggtgcgt
ccggcgccggaacccgagccggaacccgaagccgaacccggtggtcttgacctcgacgcc
gtgcgcacccggtaccaggagttccgcaacgcggtacgggaacgggccaagaccctcgaa
ccgatgctgtcggccgccgtcgtgcacgacctgcaggaccgcaccgtcgtgctcgcgcac
ccgtacgaggcgctcgtgcagcggctcggcgccccgcacgccgtctccgtgatgcgggag
gcgctgcaggaggtgttcggcaccgaacttgacgtgcgggcggtgcatcaggcgcccgga
tcggccccggcggcaggagcgtccggtggtccgcggcccgccgtgaagcagcagcccaaa
cgcactcagacctactctcgtccgagcgcccagaatcaggtcgccgcgtcgcccgcggcg
gggcaaccggaacctgccgccgacaagcagccaccgccgcccgaaccggaaccggaaccc
gaaccgccccgcgccgacgaggacattcccgaggacgaacaggcagagatggtcgccgac
gcccactcgggcacccctgaccgtcgccacgaccagggggccgccgcgctcgacctgctc
aaatccgaactgggcgcgacggttatcgagtga
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