Gordonia amarae: GII34_22620
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Entry
GII34_22620 CDS
T07320
Name
(GenBank) SpoIID/LytB domain-containing protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
gam
Gordonia amarae
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gam01011
]
GII34_22620
Enzymes [BR:
gam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GII34_22620
Peptidoglycan biosynthesis and degradation proteins [BR:
gam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GII34_22620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
LGFP
Late_protein_L1
SGP
CBM13-like
Motif
Other DBs
NCBI-ProteinID:
QHN24585
LinkDB
All DBs
Position
complement(5157337..5158812)
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AA seq
491 aa
AA seq
DB search
MSLTALGVTPVLIAGGLALGTQLGQGDDDVALTVGGSVTLTGHGHGHGRGLGQWGAYGYA
KKGWSANRILSHYYGGTTAGKAGRSEIDVVLTNQSSVSVRAGAGMRVGGQTVAPGQAVSL
SGGTANITSGCGGPVVRSVPATFVEPLNAGPSRPAGEILTFCGSGAKYRGKLGYAGGRVV
NRIHIDDYVKGVLPKEISPGWADGGGMEAIKAQAVAARTYALAALAGGKQIDDTQNSQVY
GGASVEDPRTNTAADATAGQVRLVGGKPAFTEFSASTGGYTAGGQFPAVQDDGDSISPSH
NWSMTLSPDTIGSAFGVGALRSFEVVEANGLGPNWGRAAKVRVVGSARSVDVSGEDARTT
LGLKSSFFAIKGQTSKPKIVTPPRGTGSNFGSLETIFDEILPGASQLLSVGTQLMSGKFD
DLGGITGLLGQAIGVPGLTPDGQGVVQLFQRGMMFFSADTGVHALAGRALADYQSKGGQP
VLGFPKRDALR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
ctgtcgttgacggcactgggcgtgacgcccgtgctcatcgccggcggtctggcgctcgga
acccagctcggtcagggcgacgacgatgtcgccctgaccgtcggcgggtccgtgaccctc
accggtcacggccacggtcacggtcgtggcctgggccagtggggtgcctacgggtatgcg
aagaagggctggtctgccaaccggatcctcagccactattacggcggcaccaccgcgggg
aaggcgggcaggtccgagatcgacgtcgtcttgacgaatcagagctcggtatctgtgcgc
gcgggcgccgggatgagggtcggcgggcagaccgtcgcccccggacaggctgtgagcttg
tccgggggaacagcaaacatcacctccggctgcggggggcctgtcgtgcggtccgtgccc
gcgaccttcgtcgaaccgctgaacgccgggcccagcaggcccgccggtgagatcctcacc
ttctgcggatcgggcgccaagtaccgcggcaagctcggctacgccgggggccgggtggtc
aaccgcatccacatcgacgactacgtcaagggtgtcctgcccaaggagatctcccccggc
tgggccgacggcggcggcatggaggccatcaaggcgcaggccgtggccgcccgcacctac
gcgctcgccgcgctcgccggcggtaaacagatcgacgacacccagaactcgcaggtctac
ggcggtgcgtccgtcgaggacccgcgcaccaacaccgcggccgacgccaccgccggtcag
gtccggctcgtcggcggcaaacccgcgttcaccgagttctcggcgtcgacgggcggctac
accgcgggcggccagttcccggcggttcaagacgacggcgacagcatctcgccgtcacac
aactggtcgatgacgctgagccccgacaccatcggcagcgccttcggcgtgggtgcgctg
cggtcgttcgaggttgtcgaggccaacggtctcggcccgaactggggccgcgccgccaag
gtccgcgtggtcgggtccgcccgctccgtcgacgtgagcggcgaggacgcccgcaccacg
ctcggcctcaagtcgtcgttcttcgccatcaaggggcagacgagcaagcccaagatcgtc
acaccgccgcgcggcaccggatcgaatttcggcagcctggagaccatcttcgatgagatc
ctgccgggcgcgtcgcagctgctctcggtgggtacccagctgatgagcggcaagttcgac
gacctcggaggcatcaccggcctcctcggccaggcgatcggcgttcccggtctcaccccc
gacggccagggcgtcgtccagctgttccagcgcggcatgatgttcttctccgccgacacc
ggcgtgcacgcgctggccgggcgggcactggccgactaccagagcaagggcggccagccg
gtcctcggcttccccaaacgggacgccctcagataa
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