KEGG   Gordonia amarae: GII34_22645
Entry
GII34_22645       CDS       T07320                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gam  Gordonia amarae
Brite
KEGG Orthology (KO) [BR:gam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gam02048]
    GII34_22645
Enzymes [BR:gam01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GII34_22645
Prokaryotic defense system [BR:gam02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GII34_22645
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD AAA_22
Other DBs
NCBI-ProteinID: QHN23960
LinkDB
Position
complement(5162864..5166061)
AA seq 1065 aa
MGIIPESEWEHFTVDRLAEHNWQPLKGPEIAPGTELGRASWDDLVLPDRLLAVMRELNPG
VPHEYLVQARAAILAPQSQDPMAENYRLHQIVTRGYRGITYNDHAGIEQTPTIRVASTRP
DDNEFLAVQQVTIRSREHERRFDVVLYLNGLPVVIFELKQAGSAGATVAAAHAQLQTYLR
EFPMAFRFAVITVISDGINAGYGTPFTPLEHFAPWNVDDDGKPVEIGKPIGDDDLGIELE
PLIDGVFNPERFVQLQHNFVAYDAGADGYVKRVAKPHQYFAVTKAVGNTVVAAESNGKAG
VVWHTQGSGKSMEMELYAHLVAKQPKLKNPTIIVVTDRRDLDGQLFDTFNRSRLLGESPV
KIGSRDELRHELADRTTGGIYFTTLQKFGRTKEERAAGADHPLLTDRRNVIVIVDEAHRS
HYDDLDGYARHLADAVPNATLIAFTGTPISLAERNTRDVFGPYIDIYDLTRAVDDGATVP
VYFEPRLIKVSLAEQITEDDLDRAADEATRGLDDVERAQIEKSVAVINAVYGAPQRLTAL
AADIVAHWETRSTSMLPFIETPGKALIVGATRDICARLYDEIVALKPEWHNDSESAGAIK
VVYSGSAKDQEPISRHVRRDAQNKAIQKRLKDPDDPLQIVIVKDMLLTGFDAPPLHTLYL
DRPLKGALLMQTLARVNRTFRGKPAGLLVAYAPLAENLNAALAEYTDTDQKTKPVGKRID
EAAELARETLARIDALCAGYDWRKVVRGGGANPWMRAARGLSDHLLAPDTPGVEIDGETK
SAAARYRELAGGLARAWALAGGDQALAELRPDIKFYEEVRVWMGKIEANRRQAEGKPIPD
DIRRLLSRLVADSTASGDIVDIYEAAGLPKPSLNDLTPDFEAKARAAANPHLAIEALRAT
LTEESRKATRNSVVRQREFSDRITELMRRYTNQQITSAEVIAELIAMARDIATEGNRGQN
FNPPLSDDELAFFDAVAANKSAVDLQGDDVLADIARELVRIMQRDTKYDWTIRDDVRAKL
RSSVKRVLVKFKYPPDKQPEAIKIVIEQMEALAPAYAERHAALSS
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgggcatcattcctgaatccgagtgggagcatttcaccgtcgatcggctcgccgaacac
aactggcagccgctcaaggggccggagatcgcgcccgggacggaactcgggcgggcatcg
tgggacgatctggtgttgccggatcggttgctggcggtgatgcgggaactcaatcccgga
gtgccgcacgagtatctggtgcaggcgcgggcggcgatcctggcgccgcagtcgcaggat
ccgatggccgagaactaccggctgcaccagatcgtgacccgcggataccggggcatcact
tacaacgaccatgccgggatcgaacagaccccgaccatccgggtggccagtacgcggccc
gacgacaacgaatttctcgccgtgcagcaggtcaccatccgcagccgggagcacgagcgt
cgtttcgatgtggtgctgtacctcaacggattaccggtggtgatcttcgaactcaaacag
gccgggtcggccggcgcgacggtggccgcggcgcacgcgcagttgcagacttatctgcgg
gagttcccgatggcgttccggttcgccgtcatcaccgtgatcagtgacggtatcaacgcg
ggttacgggactccgttcaccccgctcgaacacttcgcaccgtggaacgtcgatgacgac
ggcaagcccgtcgagatcggaaagcccatcggtgatgacgatctgggtatcgaactcgaa
cccctcatcgatggcgtgttcaaccccgaacggttcgtgcagttgcagcacaacttcgtc
gcctacgatgccggtgccgacggatatgtgaagcgagttgccaagccgcaccagtatttc
gcggtcaccaaggctgttggcaataccgtggtcgcagccgagagcaacggcaaggcgggg
gtggtgtggcacacccaggggtcgggcaagtcgatggagatggagctgtatgcccatctc
gtggccaaacagccaaaactgaagaaccccaccatcatcgtcgtcaccgaccgccgcgac
ctcgacgggcagctgttcgacactttcaatcggtcccggctgctcggtgagtcgccggtc
aagatcggcagccgcgacgagctgcggcacgaactggccgaccgcaccactggcggtatc
tatttcaccacgctgcaaaagttcggccgcactaaagaagaacgcgcagccggcgccgac
catccgctgctcaccgaccgccgcaacgtgattgtcatcgtcgacgaggcgcaccgtagc
cactacgacgacctcgacggctacgcccggcatctcgccgacgccgtccccaatgcgacg
ctcatcgcattcaccggtacaccgatctccctggccgaacgcaatacccgtgatgtgttc
gggccgtacatcgatatctacgacctgacccgcgccgtcgacgacggtgccaccgtgccg
gtgtatttcgagccaaggttgatcaaagtgtcactggcggaacagatcaccgaggacgat
ctcgaccgggccgccgacgaggccacccggggactcgatgatgtcgaacgcgcccagatt
gagaagtccgtcgccgtcatcaacgcggtatacggtgcgccgcaaagactcaccgcactc
gctgccgatatcgtcgcccactgggaaacgcgttcgacgtcgatgctgccgttcatcgaa
acccccggcaaagcgcttatcgtcggtgccacccgagacatctgtgcccgcctctacgac
gaaatcgtcgcactgaagccggagtggcacaacgattccgaatccgccggggccatcaag
gtggtctattcgggatcggcgaaagatcaggaaccgatcagccggcacgtgcggcgagac
gcacagaacaaggccatccagaaacgcctcaaggaccccgacgacccgttgcagatcgtc
atcgtcaaggacatgctgctcaccggattcgacgcaccgccgctgcacaccctgtacctc
gaccgccccctcaaaggtgcgctgctcatgcagaccctggcgcgagtgaaccgtactttc
cgtggcaaaccggcgggtctgctcgttgcttacgcaccgctcgcggagaatctgaacgcg
gcgctggccgagtacaccgacactgaccagaagaccaaacccgtcggcaaacgcatcgac
gaagcggccgaactggcccgcgagacactcgcacgcatcgatgcactgtgcgccggatac
gactggcggaaagtggttcgcggcggcggtgcaaacccgtggatgcgggccgctcggggc
ctttccgatcacctgctcgcccccgacacgcccggtgttgagatcgacggggagacgaaa
tcggccgcggcgcgctaccgcgagctggccggcggtctcgcccgtgcctgggcgctggca
ggcggcgatcaagcactcgccgaactgcgccccgacatcaagttctacgaagaagtgcgc
gtgtggatgggcaagatcgaagccaaccggcgccaggccgagggcaaacccatccccgac
gacatcaggcgcctgctgtcgcggctggtcgccgactccaccgcatccggtgacatcgtc
gacatttacgaggccgccggtctgcccaaaccgtcactgaacgatctgacccccgacttc
gaggccaaagcgcgggcggccgccaatccgcacctggcgatcgaggcactgcgcgccacc
ctcaccgaggaatcccgcaaggccacccgcaacagtgtcgtgcggcaacgggaattctcc
gaccggatcaccgagctgatgcgccgctacaccaaccagcagatcacctccgccgaggtg
atcgccgagctcatcgcgatggcccgcgacatcgccaccgaaggcaaccggggtcagaac
ttcaacccaccgctgtccgacgacgaactggccttcttcgacgccgtcgctgccaacaag
tcggctgtcgacctgcagggcgacgacgtgctcgccgacatcgcccgcgaattggtgcgc
atcatgcagcgggacaccaagtatgactggaccatccgcgatgatgtgcgcgccaaactg
cgctcatcggtgaaacgggtactcgtcaaattcaagtacccgcccgacaagcagccagag
gccatcaagatcgttatcgaacagatggaggcactggcgcctgcctatgccgagaggcat
gcggcgctctcgtcgtaa

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