Grus americana (Whooping crane): 129195784
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Entry
129195784 CDS
T11359
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
game Grus americana (Whooping crane)
Pathway
game03013
Nucleocytoplasmic transport
game03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129195784 (SRRM1)
03015 mRNA surveillance pathway
129195784 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129195784 (SRRM1)
03041 Spliceosome [BR:
game03041
]
129195784 (SRRM1)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129195784 (SRRM1)
Spliceosome [BR:
game03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
129195784 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
129195784
NCBI-ProteinID:
XP_054658170
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Position
23:complement(50281..70148)
Genome browser
AA seq
893 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASRTSASPPPPRRGASASPQRRQSPSPSTRPIR
RVSRTPEPKKTKVSTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPTRSRSPSANWSPA
KKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVA
AADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagcgccgaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcatttcttgaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcc
cctcggaggagatcgtcgcctgtcagaagagagcggaaacgcagccattctcgttcccct
caccacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagcccctaaacctgagcctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaaggtctcgatcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcgaggtcttactcccctagaaggcgaccgagcccaagacga
cggccatctccaaggagaaggagccctccaaggcgaatgcctccccctcccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttgtctggcagcagc
tcttcatcctcctcctcacgctcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacgcgtaggctctctccttcggcaagccctcctagacggagg
cacagaccatccccaccggcaagtccacctccaaaaccacgtaggtctccaacaccccag
cagtcaaaccgtgcaagaaaaagccgtggctctgtttcacctggcagagcatcagcaccc
aagcataagagtactgaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagca
gaactgtctgaatcagaggaagataaaggaggtaaaatggctgcagcagactccgttcaa
cagaggcgtcagtacagaaggcaaaatcaacagtcttcatctgattctggttcttcatct
tcatctgaagaagaaagacctaaaagatccaatgtgaagaacggggaggttggtagacgc
cgacgccattcgcattcacgcagtccgtcgccgtctccgcgaaaacgacagaaggaatcc
tcccctcgcaggaggaggagaagtccatcgcccccaccagccaggcggcgacgctctcct
tcacccgcccctcctcctaggcggcggcgctcaccctcgttacctcgtcgaaggtctcca
tcaccacccccacgcagacgttcaccttctccgcggagatactctccaccgatacagaga
cgatattctccttcaccgccacctaagagaagaacggcttctcctcctcccccgcctaaa
cgaagggcatcaccttctccacagtcaaaacgcagagtttcccattcaccgccgccaaaa
caaaggagctcgccagctgctaaaaggcgttcaccttcgatatcttccaagcacaggaag
ggatctcctcccagtaggtccaatcgggaaacacgttctccaccacaaaacaaaaggcat
tcaccttctccacggcctagagcttctcgtacctctgcaagcccaccaccaccacgaagg
ggagcttcagcttcaccccagagaagacagtctccatctccaagcactagacccatcagg
agggtgtcaagaacgccagaacccaagaagacaaaggtttccacaccaagtccacgatct
gcgagacgggtgtcttcatcacggtctgcatcaggatcgccggagccagcaccgaaaaaa
catcaaggacctccatctcctactcgctctcgttctccttctgcaaactggtcacctgca
aaaaaggctaaaagcccaactcagagcccgtcacctgcaaggaattccgatcaggaaggg
ggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaagcacaag
aaacacaaaaaacataagaaggagaaggctgcagcggctgcagcagctgctgctgtggct
gcagcagataccacctcagcacaggaagaccaggaagcggagacagaacccaaaaaggag
acagaaagcgaaccagaagacaaccttgatgatctagaaaaacacctgcgagagaaggca
ctgaggtcgatgaggaaggcacaagtgtcgccaccatcctag
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