Grus americana (Whooping crane): 129196460
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Entry
129196460 CDS
T11359
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
game Grus americana (Whooping crane)
Pathway
game04514
Cell adhesion molecule (CAM) interaction
game04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129196460 (NFASC)
04517 IgSF CAM signaling
129196460 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
game04515
]
129196460 (NFASC)
Cell adhesion molecules [BR:
game04515
]
Immunoglobulin superfamily
L1 family
129196460 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_5
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
129196460
NCBI-ProteinID:
XP_054659958
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All DBs
Position
25:complement(5669775..5766887)
Genome browser
AA seq
1368 aa
AA seq
DB search
MVMRRHHLTCAGIAFALCLHHLVSTIEVPLDSNIQSELPQPPTITKQSVKDYIVDPRDNI
FIECEAKGNPVPTFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPEDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPSPVIFWMSSS
MEPIHQDKRVSQGQNGDLYFSNVMLQDAQTDYSCNARFHFTHTIQQKNPYTLKVKTKKPH
NETSLRNYTDMYSARGITETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPAGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PQNLILAPGEDGRLVCRANGNPKPAIQWLVNGEPIEASPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILAPRNQLIKVIQNNRTRLDCPFFGSPIPTL
RWFKNGQGNTLDGGNYKAHENGSLEMNMARKEDQGIYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVKRGSMPRLHCRIKHDPTLKLTVTWLKDDAPLYLGNRMKKEDDGLTIYGV
AEKDQGDYTCIASTELDKDSAKAYLTVLAIPANRLRDLPKERPDRPRDLELTDLAERSVR
LTWIPGDDNNSPITDYIVQFEEDRFQPGTWHNHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSLPSVPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVKTPRHIVWNTPIYVPYEIKVQAENDFGRAPEPDTVIGYSGEDYP
KAAPTDVRIRVLNSTAVALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQYVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEVKEFPTPEGVPSSPRYLRIRQPNL
ESINLEWDHPEHPNGVLTGYNLRYQAFNGSKTGRTLVENFSPNQTRFTLQRTDPISRYRF
FLRARTQVGEGETIVEESPALLNEATPTPGTVPAGGAATGLPPTTIGLTSTTTTAPTTTT
TTDTTTTTTDTTTTTTDTTTTTTTAATSPPATTVASTTAATERAPAATTKQELATNGSSI
WDIRAMANSNWANITWSHNYSAGTDFVVKYITSNKTEKSIPVKAQTPSSVQLANLTPGMM
YKLWVFPIWSSPSEHSYITFTTSSAYTKNHVDIATQGWFIGLMCAIALLVLILLIVCFIK
RSRGGKYPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLV
DYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgcgaagacaccacctcacctgcgcaggaatagcgttcgctctctgccttcat
cacctcgtcagcaccatcgaagtccccctggactcaaatattcagagtgaattgcctcag
ccccccacaatcaccaagcagtccgtgaaggactacatcgtcgacccaagggataatatc
ttcattgaatgtgaagccaaagggaaccctgttcccacattttcctggacgcggaacggg
aagttcttcaacgtggcgaaggaccccaaggtgtccatgcggcggcggtcggggacactg
gtcatcgacttccacagcgggggacggccagaggactacgagggcgagtaccagtgcttt
gcccggaatgactacgggactgctctctccagcaaaatccacctccaggtttctaagtct
cccctgtggcccaaggagaaggtggatgtgatagaggtggatgaaggtgctccactcagc
ctgcagtgcaacccaccgcctggcctgccttctcccgtcatcttctggatgagcagctcc
atggagcccatccatcaggacaagcgcgtctcccagggccagaacggcgacctgtacttc
tccaacgtcatgctgcaggatgcccagaccgactacagctgcaacgcgcgcttccacttc
acccacaccattcagcagaaaaacccctacaccctcaaggtgaaaaccaagaaaccccat
aacgaaacgtctttacgaaattacactgacatgtacagtgcccgagggattacagaaaca
actcccagcttcatgtatccctacgggacctcaagcagtcagatggtgctcagaggggtg
gacctcttgctggagtgcattgcttcaggagtaccagcaccagacatcatgtggtacaag
aaaggaggagagctcccagcaggcaaaaccaagctggaaaactttaacaaggctcttcgt
atctccaatgtctccgaggaagactccggggagtatttctgcttggcgtcaaacaagatg
ggcagcatccgccacacgatctcggtgagagtgaaggctgctccgtactggttggatgaa
ccccaaaacctcattctggcccctggcgaggacggcagactggtgtgtcgagccaacggg
aaccccaagcctgcgatacagtggctggtgaacggcgagcccatagaagcttctcccccc
aacccgagccgagaggtggctggagacaccattgtgtttcgagatacccagatcggcagc
agtgccgtgtaccaatgcaacgcgtccaacgagcatggctacctcctcgccaatgccttt
gtcagcgtcctggatgtacctccacggatcctggccccccgcaatcagctcatcaaggtc
attcagaacaacaggacccggctcgactgccccttctttggctcaccgatccccaccctg
agatggtttaagaacggccaggggaacacgctggatggagggaactacaaggcgcacgag
aacgggagcctggagatgaacatggctcggaaggaggaccagggcatctacacttgtgtc
gctaccaacatcttgggtaaagcggaggcccaggttcgcctggaggtcaaagacccaacc
aggattgtgagaggaccagaagatcaggtggtgaagaggggctccatgcctcgcctccac
tgccgtataaagcacgaccctacgctgaaactcacagtcacctggctgaaagatgatgca
cccctgtaccttggaaacaggatgaagaaagaagacgatggtctgacaatatatggcgtg
gctgaaaaggaccaaggggattacacctgcatagcgagcacggagctggacaaggactca
gctaaagcgtacctcaccgtcctagccatccctgctaaccgtttgagagacttaccgaaa
gaacgacccgaccggccccgtgacttggagctgacagacctggccgagaggagcgtgcgg
ctgacgtggattcctggcgatgacaataacagccccatcacagactacatcgtccagttt
gaggaggaccggttccaacctggcacgtggcataaccactccaggtaccccgggagcgtc
aactcagccgtcctgagcctctctccttacgtcaactaccagtttcgggtgattgcagtg
aacgacgtgggcagcagcctgcccagcgtgccctctgaacgataccagaccaacggggca
cgtcctgaaattaacccaacgggagttcaaggtgcagggacccaaaaaaacaacatggag
ataacctggacgcctctgaatgcaactcaagcttatgggcccaacctcaggtacatcgtg
agatggaggagaagggacccccggggcagctggtacaatgagacagtgaagacaccgcgg
cacatcgtctggaacacacccatctacgtaccctacgagatcaaagtgcaggcagagaat
gactttggtagagcaccggagcctgacaccgtcatcggctattcaggggaagattatccc
aaggctgcgcctacggatgttaggataagggttttaaacagcactgccgttgctctgacc
tggacccgagtgcacctggacaccatccagggacagctcaaggagtacagagcctatttc
tggagagacagtagtttgctgaagaacctgtgggtctccaaaaaacggcagtatgtgagt
tttcctggagaccgaaaccggggcatagtgtcccggctgtttccttacagcaactacaag
cttgagatggttgtaaccaacgggagaggagatgggccacgcagtgaagttaaggagttc
cccacaccagaaggagtgcccagctcccccaggtatttaagaatccgacagccaaatctg
gaaagcatcaatctggagtgggatcacccagagcatcccaatggagtcctcacaggatac
aaccttagatatcaagcctttaacggatccaaaacgggccgaaccctggtagagaacttc
tctcccaatcagacaaggttcaccctgcagaggacagaccccatctcgcgctatcgcttc
ttcctgcgggcacggacccaggtgggagaaggagaaaccatagtggaggagtcgccagcc
ttgctgaacgaagccacgccaaccccaggtaccgtaccagccggaggagctgcaactggg
ttgcctccaactacaatcggtctaaccagtactactacaacagccccaactaccaccacc
accaccgacacaactaccactactaccgacacaactaccactactaccgacacaactacc
accaccactacagccgccacctctccacccgccaccaccgtcgcaagcactacagcagct
acagagagggctccggcagccaccacaaagcaggagttggccaccaatggatcgtccata
tgggacataagagctatggctaatagtaactgggcaaacatcacctggagccacaattac
tctgcaggaactgactttgtggttaagtatatcaccagtaacaagacagagaaatctatc
cctgttaaagctcagaccccttcctctgtgcagctggcgaatctgacgccgggaatgatg
tacaagctgtgggtgttccccatatggtctagccccagcgaacactcgtacataaccttt
accaccagctcagcttataccaagaatcacgtggacatcgcaacgcagggctggttcatc
gggctgatgtgtgccatagctctcctggtcctcattctgttgatcgtctgcttcattaag
aggagcagaggcgggaaatatccagtacgagacaataaagacgagcatctaaatcccgaa
gacaagaacgtagaagacgggtcgtttgactacagcgatgaagacaacaaacccctgcca
aacagccagacctccttggacggcacgataaagcagcaggagagtgacgatagcttggtg
gactatggagaggggggcgaagggcagtttaacgaggacggctcctttatcggccagtac
acggtgaagaaggacaaagaggagaccgaaggcaacgagagctcggaagccacctcccca
gtcaatgctatctactcgttggcatag
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integrated database retrieval system