Grus americana (Whooping crane): 129197630
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Entry
129197630 CDS
T11359
Symbol
SMG5
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5 isoform X1
KO
K11125
protein SMG5
Organism
game Grus americana (Whooping crane)
Pathway
game03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129197630 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129197630 (SMG5)
03032 DNA replication proteins [BR:
game03032
]
129197630 (SMG5)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129197630 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
129197630 (SMG5)
DNA replication proteins [BR:
game03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
129197630 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129197630
NCBI-ProteinID:
XP_054662234
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Position
29:739237..772098
Genome browser
AA seq
1047 aa
AA seq
DB search
MSQGGGATGESGEPEAKVLHTKRLYRAVVEAVHRLDLILGNKAAYQEVFKPENISLRNKL
RELCVKLMFLHPVDYGRKAEELLWRKVYYEVIQLIKTNKKHIHSRSTLECAYRTHLVAGI
GFYQHLLLYIQSHYQLELQCCIDWTHVTDPLIGCKKPVSASEKEMEWAQMACHRCLVYLG
DLARYQNELAGVDTELLAERFYYQALSVAPQIGMPFNQLGTLAGSKYYNVEATYCYLRCI
QSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETRKLSPSKKRGKDIKRLLVSFMYLQSLLQ
PKSSSLDSELTSLCQSVLEDFNLCLFYLPSPNLSSTSEDEEEYESGYSFLPDLLIFRMVI
ICLMSVHSLKRAGSKQYSAAIAFTLALFSHLINHVNIRLQAELEEGENPVPAFQSDGTDD
QESREPLNSIEKEAETDLTNHQPSEEQRKNDCKKSKKYSRLSCLRRRRHPQKVDESDLSE
GFDSDSSQGSIKGSDGSESGSEKSDEEAEAAFDVETDSDMNSQESRSDLEDMEDEPGEEG
SVRGKSGPKEALNCVDGSGLGDSKSPSISKIEAPDPAVNGPASLSTNDASIASNLQAMST
QLFQTKRCFRLAPTFSNILLKPNSEPPVLKDGIESKPCVNGDLEKPSLAEQDDLSDSEES
ISSNKSCRNERSLQEKLEIVTNEGLLLTVKVFLDWLRTNTDLIIMCAQSSQSLWNRLSVL
LNLLPSAADLQESGLVLCNEVKDVLSGAELPDLKANLLLPEDVALRNLPPLKNAHKRFNF
EQDRPIFSAVEESVVRICCIRSFGHFITHLQGSILQFNSELGIFISIAQSEQDNLLHQAQ
AQFHMAAEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSAMSPYLVPDTQALCQHLA
VVKQLATSGRFIIIIPRTVIDGLDFLKKENAGARDSIRYLEAEFKKGNRYIRCQKDVGKS
FERHKLKRQDLDAWNLYKILDSCKQLTVSQGSGEDDTTGMVTIITGFQLEDPSAFSAPMQ
SAIQAAANASVEIKNVLEFYKQWKEMG
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgagccagggcggcggggccaccggcgagagcggcgagccggaggccaaggtgctgcac
accaagcggctgtaccgagcagtggtagaggccgttcatcgattggatctcatccttggt
aataaggcggcgtatcaagaagtgttcaagccagagaacatcagcttgaggaacaagctg
cgtgagctgtgtgtgaagctcatgttcttgcatccagtggattatggaagaaaagcagaa
gaactactctggagaaaagtttactatgaagttatccagctcattaaaacaaataaaaag
cacattcacagccgtagcactctggagtgtgcgtaccggactcacttagttgctggcata
ggattttaccagcaccttctcctctacattcagtctcactatcagctggagctgcagtgc
tgtattgactggacgcacgtaacggaccctctaataggctgcaagaaacctgtgtctgca
tcagagaaggagatggagtgggcacagatggcatgtcacagatgtctggtttatctggga
gatctagctcgctatcagaatgaactggcaggtgtggacactgagttgctggctgagcgg
ttttactatcaagcactttctgttgcaccgcaaattggtatgccctttaaccagctgggg
acattggcagggagcaaatactacaatgtggaagctacctattgctacttacgctgtatc
cagtctgaagtgtcctttgaaggtgcctatgggaacctgaagcggctgtatgacaaagca
gccaaaatgtatcaccagttgaagaaatgtgaaaccaggaagttgtctccaagcaagaaa
cgaggcaaagacattaagaggttgctggtgagctttatgtacctgcagagtcttttgcag
ccaaagagcagctctctggattctgagctcacatctctctgccagtctgtgctggaggat
ttcaacttgtgcttgttctacctgccctctcctaatctgagctcgactagtgaagatgaa
gaagaatatgagagtggctactctttccttcctgatctcctgatctttcgcatggtgatc
atctgccttatgagtgttcacagcctcaagagggcaggttcaaagcagtacagtgcagcc
atcgctttcacgctggccctcttctctcacctgataaatcacgtcaatattcgcctgcag
gcagagctagaagaaggggaaaatccagtcccagcctttcagagtgatggcacagatgac
caggagtcacgggagccgttgaactcgattgagaaggaagctgaaactgacttgaccaat
catcagcccagtgaggaacaacggaagaatgactgcaagaaaagcaagaaatattcacgc
ctctcctgtttgcgtcgccgccgccacccccagaaggtggatgagagtgacctgagcgag
ggctttgactctgactccagccagggctccataaagggtagtgatggctcagaaagtggc
tcagagaagagcgatgaggaagcagaagctgcttttgatgtggagacggactctgacatg
aacagccaagaatctcggtccgacttggaggacatggaggatgagccgggtgaggaggga
agcgtccgaggcaaaagcgggcccaaagaggccttaaactgtgtggatggcagtgggctg
ggggactccaagagcccaagcatctctaaaattgaggctccagatccagcagtcaatggg
ccagcttccctgagcactaatgatgcaagcatagccagtaatctccaggccatgtccacc
cagctgtttcagaccaaacgctgctttcgcttggcacccactttcagcaacatccttctg
aaaccgaacagtgaaccgccggtcttgaaggatgggatagaaagcaagccatgtgtcaat
ggagatctggagaagcccagcttggcagagcaagatgatttgtctgactctgaggaaagc
atttcaagtaacaaatcctgcaggaatgaacgatcccttcaggagaagctagagatcgtg
accaacgaagggctgcttctcactgtcaaggtgttcctggactggctgaggacaaacact
gacctcattatcatgtgtgctcagagctctcagagcctatggaacaggctgtctgtgctc
ctgaaccttctgccttctgctgcagacctgcaggaatcagggctggtcctatgtaacgaa
gtcaaggacgttctgagtggtgctgagctcccagacctgaaagccaacttgctgctccca
gaagatgtggccctgagaaatcttccccctctgaaaaatgcacacaagaggtttaacttt
gagcaggaccggcccattttctcagcagttgaggagtccgttgttcggatttgctgcatt
cggagctttggccacttcattacccacttgcaaggcagcatcctgcagttcaattcagag
cttgggatcttcatcagcatagcacagtcggaacaagacaacttgctgcaccaggcccaa
gcccagtttcacatggctgcagaggaagctcgtcggaacaggctgatgagagatatggct
cagcttcgactgcagctggaggtttctcagctggagggaagtctccagcagcccaaagca
cagtcagccatgtctccttatcttgtcccggatactcaggccctctgccagcacctggct
gttgtcaagcagctggccaccagtgggaggttcataatcatcatccctcgaacagtgatt
gatggcttagacttcctgaaaaaggagaacgcaggtgctcgggacagcatccggtatctg
gaggcagaatttaaaaagggaaacaggtacattcgttgccagaaagatgttgggaagagc
tttgagaggcacaaattgaagagacaagatttagatgcctggaatctctataaaatactg
gacagctgcaaacaactgacagtgtcccaaggaagcggagaggatgacaccacaggaatg
gtcaccatcatcacgggctttcagctggaggacccaagcgcgttctcggcgcccatgcag
tctgccatccaggcagccgccaatgccagtgtagaaataaaaaatgttctggagttctac
aagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
