Grus americana (Whooping crane): 129198527
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Entry
129198527 CDS
T11359
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
game Grus americana (Whooping crane)
Pathway
game03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129198527 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129198527 (SMARCA4)
03036 Chromosome and associated proteins [BR:
game03036
]
129198527 (SMARCA4)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129198527 (SMARCA4)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129198527 (SMARCA4)
Chromatin remodeling factors
BAF complex
129198527 (SMARCA4)
PBAF complex
129198527 (SMARCA4)
GBAF(ncBAF) complex
129198527 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
129198527
NCBI-ProteinID:
XP_054663855
LinkDB
All DBs
Position
33:1405605..1430471
Genome browser
AA seq
1646 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPLPPQG
PGGYAQDNMHQMHKPMDSMHEKGITDDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPANGPSSGPQLSSGPGGVPLDGTDPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSGTGPVQGPVQGPGP
GPTPPNYNRPHGIGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSAPQKL
IPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVQLHQKQNRITPIQKPRGLD
PVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVV
CMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQH
AKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLI
DQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIGPD
GEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGS
EEEEEEEEEEQPQPAQPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQA
LARGLQSYYAVAHAVTERVDKQSTLMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGL
GKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRA
FVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA
PRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETIL
IIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSE
KDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFE
LLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFN
EPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLR
LCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDENRYSA
GSGSGSASFPHTASTLCLNAELEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMDLDR
RREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSL
TEKQWLKVYMAIEEGTLEEIEEEVRQKKSSRKRKRDTDVGSATPTTSTRSRDKDDDSKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEEESEGEDSEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGRRRTSRGSR
AKPVVSDDDSEEEQEEDRSGSGTEED
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactccggatcctccgctgggaggaacccctcggccgggtccctctccggggccg
ggtccgtccccgggggcgatgctgggtcccagccccggtccttctcccggttccgcacac
agcatgatgggacccagccccgggccgccctcggcgggacacccgctgccgccccagggg
ccggggggctacgctcaggacaacatgcatcagatgcacaagcccatggactccatgcac
gagaagggaataaccgacgatcctcgctacggccagatgaaagggatgggaatgcggccc
ggcgggcacgcgggaatgggtcctcccccgagcccgatggatcagcactcgcaaggttac
ccttctccgctcggcggttccgaacacgcctcgagtcccgttccggcgaacggtccgtcc
tccggccctcagctatcctcgggtcccggaggagtccccttggacggtaccgatccccaa
gctctgggacaacaaaaccggggtccgaccccttttaaccagaaccagttacaccagtta
agagctcagatcatggcttacaagatgctggcgaggggccagcccctgcccgaccacctt
cagatggcggtgcagggaaaacgacccatgcccggaatgcagcagcaaatgccgacacta
cctccgccttccgtatccgggacaggaccagtgcaaggaccagtgcaagggcctggaccg
ggaccgacacctccaaactataacagacctcacggtatcggagggcctaacatgccccct
cccggaccctcaggagttcccccgggaatgcccgggcaaccccccggcggcccccccaaa
ccctggccggaaggaccgatggcgaacgccgcagcccccactagcgcacctcagaaactg
attcccccccagcccaccggccggccctcgccagcccctccggcggtgccgcccgccgcg
tcgcccgtgatgccgccgcagacgcagtccccgggtcagccggcgcagccggctcccatg
gtgcagctccaccagaaacagaaccgcatcacgccgatccagaaacccagaggactcgat
ccggtggaaatcctgcaggagagggagtacaggctgcaagctcgaatcgctcacaggatc
caagagctggaaaaccttcccggctcgctggccggtgacctgagaaccaaagcaaccatt
gaactgaaagcactaaggctgcttaattttcagcgacagctgcgtcaggaagtcgtggtg
tgcatgaggcgagacacggccctggagacggccctgaacgccaaggcgtacaagcgcagc
aagcggcagtccctgcgcgaggctcgcatcaccgagaagctggagaagcagcagaagatc
gagcaggaacggaaacgcaggcagaagcaccaggaatacctcaacagcatcctccagcac
gctaaagatttcaaggaataccatcgctccgtcacgggcaagattcagaagctgaccaag
gcggtggctacttaccacgccaacacggagcgggagcagaagaaggaaaacgagaggatc
gagaaggagaggatgcgccgtctgatggcggaggatgaggaagggtaccgcaagctgatc
gatcagaagaaggacaagcgcttggcctacctgctgcagcagacggacgagtacgtagcc
aacctgacggagctggtgcggcagcacaaggccgcgcaggtggccaaggagaagaagaag
aagaagaaaaagaagaaggcagagaacgcggaagggcagacgccggccatcgggccagat
ggtgaaccgctggatgagacgagccaaatgagcgacctccctgtcaaagtgatccacgtg
gagagcggcaagatcctcaccggcaccgacgcgccgaaagccgggcagctggaagcctgg
ctggagatgaaccccgggtacgaagtagctccgagatctgacagtgaagaaagcgggtcg
gaggaggaggaggaggaggaggaagaggagcaaccacaacccgctcagcccgccctgccc
gtggaggagaagaaaaaaatccccgacccggacagcgacgacgtctcggaagtggacgcc
agacacattatcgagaacgctaagcaagatgtcgatgacgaatacggggtgtcccaagct
ctggcgaggggcttgcagtcgtactacgccgtggcccacgccgtcaccgagagggtggac
aagcaatccacgctgatggtcaacggagtcctcaagcagtaccagatcaaaggtttggag
tggctggtgtccctgtacaacaacaacctgaacggcatcctggcagatgagatggggctg
ggcaaaaccatccagaccatcgctttaatcacatacctcatggagcacaaacggatcaac
ggacccttcctcatcatagtacctctctcaactctgtcgaattgggcgtatgagtttgac
aaatgggctccttctgtggtgaaggtctcgtacaagggctctccagcagcaagacgggca
tttgtacctcagctccgaagcgggaaattcaacgtcttgctcacaacttacgagtatatc
atcaaagataagcacatcctggctaagatccgctggaagtacatgatcgtggacgagggt
cacaggatgaagaaccaccactgcaaactcacccaggtcctcaacacgcactacgtggct
cctcggcgtttgttgttgacgggaacccccttgcagaacaaactcccggagctgtgggct
ctgctcaatttcctcctgcccaccatcttcaagagctgcagcacgttcgagcagtggttt
aacgcccctttcgccatgacgggagaaaaggtggacctgaacgaagaagaaaccatcctg
atcattcggcgcctgcacaaagtgctgcgccctttcctgctgcggaggctgaagaaggaa
gtagaagcgcagctgcctgaaaaggtggaatacgtcatcaagtgcgacatgtccgctctg
cagagggtcctctacaggcacatgcaggccaagggcgtgctgctcacggacggctccgag
aaggacaaaaagggcaaaggcggtacgaaaaccctgatgaacaccatcatgcagctgcgg
aagatctgtaaccacccctacatgttccagcacatagaggaatccttttccgagcacttg
gggttcacgggaggtatcgtgcaagggctggatttgtaccgagcctcgggcaaatttgaa
ctcctggacagaattctccccaaattacgagccaccaaccataaggtgctgctcttctgc
cagatgacctccctcatgaccatcatggaagattactttgcttaccgcggattcaaatac
ctcaggctggacggaaccactaaggcggaggaccggggcatgttgttaaagactttcaat
gagccaggctccgagtacttcatttttttactgagcacgcgggctggcgggctgggtctg
aacctccagtctgccgacactgtgattatctttgacagcgactggaaccctcaccaggac
ctgcaggcgcaagaccgagctcaccgcatcgggcagcagaacgaagtgcgcgttctccgg
ctctgcaccgtcaacagcgtggaggagaagatccttgccgccgccaaatacaagctgaac
gttgatcagaaggttatccaagccggcatgtttgaccagaaatcctcgagccacgaacga
agagctttcctccaggctatcttggaacacgaggagcaggacgagaacagatacagcgcg
ggcagcggcagtggcagtgcaagcttcccccacactgcctcgaccctgtgcctgaacgct
gagttggaggaaccacctctaaaggaagaagacgaagttcccgacgacgaaacggtcaac
cagatgattgcgcggcacgaagaggagtttgaccttttcatgcgcatggacctggaccgc
aggcgggaagaagcgcgaaaccccaagcgcaaaccgcgcctgatggaggaagacgagctg
ccgtcgtggatcatcaaggacgatgccgaggtggagaggttgacgtgtgaggaagaggag
gagaagatgtttgggcgaggctcgcggcaccgtaaggaggtggattacagtgactcgctg
acggagaagcagtggctcaaggtatacatggcgatcgaggagggtacgctggaggagatc
gaggaggaggtgcgccagaaaaaatcctcccgtaaacgcaagcgggatacggacgtcggc
tccgccacccccaccaccagcacccgcagccgggataaggacgacgatagcaaaaagcag
aagaaacgtggcaggccgccggcggagaaactctccccaaacccccccaacctcaccaaa
aaaatgaagaagatcgtggacgccgtcatcaagtacaaggacagcagcagtggacggcag
ctcagcgaagttttcatccagctgccttcccgcaaggagctgccggaatactacgagctc
atccgcaagcccgtcgacttcaagaaaatcaaggagcgaatccgtaaccacaagtaccgg
agcctgaacgacctggagaaggacgtcatgctgctgtgccagaacgcgcagaccttcaac
ctcgagggctccctgatctacgaggactccatcgtcctccagtccgtcttcaccagcgtg
aggcagaaaatcgagaaggaggaggagagcgaaggcgaggacagcgaggaggaggaggaa
ggcgaagaggaaggctccgaatccgagtcccgctcggtgaaggtgaagatcaagctgggg
cggaaggagaaggcgcaggaccggctgaagggccgtcggcgtaccagccgcggctcccgc
gccaagcccgtggtgagcgacgacgacagcgaggaggagcaggaggaggatcgctccggc
agcggcaccgaggaagactga
DBGET
integrated database retrieval system
