Grus americana (Whooping crane): 129198689
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Entry
129198689 CDS
T11359
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X1
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
game Grus americana (Whooping crane)
Pathway
game03022
Basal transcription factors
game03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129198689 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
129198689 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129198689 (ERCC2)
03036 Chromosome and associated proteins [BR:
game03036
]
129198689 (ERCC2)
03400 DNA repair and recombination proteins [BR:
game03400
]
129198689 (ERCC2)
Enzymes [BR:
game01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129198689 (ERCC2)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129198689 (ERCC2)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129198689 (ERCC2)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129198689 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
129198689
NCBI-ProteinID:
XP_054664177
LinkDB
All DBs
Position
34:complement(424117..430752)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIIAYQ
RARPLDVTKLIYCSRTVPEIEKVIEELRKLMDFYEKELGEKVPFLGLALSSRKNLCIHPE
VSLLRFGKEVDSRCLSLTASYVRAQHQRDGSLPACRFFEDFDTHGREAPLPYGVYNLDEL
KAYGRRHGWCPYFLARYSILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMGVNITRRTLDRCQANVATLQSTIQKIKETDARRLTEEYRRLVEGLRDAGVARE
TDLYLANPVLPDEILREAVPGSIRTAEHFVGFLKRLVAYLRARVRGPRVVQESPPAFLKD
LYEKVCIERKPLRFCAERLRSLLRTLEIADVGDFSAITLVADFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASIAIKPVFERFQSVIITSGTLSPLDIYPKILDFRPVTMAT
FTMTLARTCLCPMIVGRGNDQVAISSKFETREDIAVIRNYGNLLLELSAVVPDGIVAFFT
SYQYMENIVASWYEQGILENIQRNKLIFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVVMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGLMVFADKRFARADKRGKLPRWIQERITDANLNLTVDEAVQVAKFF
LRQMAQPFHQEDQLGLSLLTLEQLQSQEVLQRIEQIAQQV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaacatcgacggcctcctggtctacttcccctatgactacatctaccctgag
cagttctcctacatgctggagctcaagaggaccttggatgccaagggtcacggcgtcctg
gagatgccctcggggaccgggaagacggtgtcactgctgtcgctcatcatcgcctatcag
cgggcccggccgctggacgtcaccaaactcatctactgctcccgcacagtgccagagatc
gagaaggtgatcgaggagctgcggaagctgatggatttctatgagaaggagctgggggag
aaggtgccattcctggggctggcgctgagctccaggaagaacctctgcatccacccggag
gtgtccttgctgcgcttcgggaaggaggtggacagccggtgcctcagcctgacggcctcc
tacgtgcgggcgcagcaccagcgtgacggatctctgcccgcctgccgcttcttcgaggac
ttcgacacccacgggcgtgaggcgcccctcccctacggcgtctacaacctggacgagctg
aaggcgtacggccgccgccacggctggtgcccctacttcctcgcccgctactcgatcctc
cacgccaacatcgtggtttacagctaccactacctgctggaccccaaaatcgccgactta
gtttccaaagaactggctaaaaaatcggtggtggtttttgatgaagcgcacaacatcgac
aacgtctgcatcgactccatgggggtgaacatcacacgccgcaccctcgaccgctgccag
gccaacgtcgccacgctccaatccaccatccaaaagattaaggagacggacgcgcggcgg
ctgacggaggaataccggcggttggtggaggggctgcgggacgccggcgtggcgcgggag
accgacctctacctcgccaacccggtgctgccggacgagatcctgcgcgaggcggttccc
ggcagcatccggacggccgagcacttcgtgggcttcctgaagcggctggtggcttacctg
cgggcgcgggtgcgggggccgcgtgtggtgcaggagagcccccccgccttcctcaaggac
ctctacgagaaggtctgcatcgagcgcaagcccctgcggttctgcgccgagcggctgcgg
tcgctgctgcggacgctggagatcgcggacgtgggcgacttctccgccatcaccctcgtc
gccgacttcgccaccctcgtcagcacctacgctaagggtttcaccatcatcatcgagccc
ttcgacgaccggacccccaccatcgccaaccccatcctgcacttcagctgcatggacgcc
tccatcgccatcaaacccgtcttcgagcgcttccagtccgtcatcatcacgtcagggact
ctctccccgttggacatttaccccaaaatcttggatttccgccccgtcaccatggcgacc
ttcaccatgacactggcccggacctgcctctgccccatgatcgtgggtcgtggcaacgac
caggtggccatcagctccaagtttgagacccgcgaggacatcgccgtcatccgcaactac
gggaacctgctgctggagctgtcggccgtggtccccgacggcatcgtcgccttcttcacc
agctaccagtacatggagaacatcgtggcctcctggtacgagcagggcattctggagaac
atccagcggaacaaactcatcttcatcgagacgcaggacggcgccgagaccagtgtggcc
ctggagaagtaccaggaggcctgcgagaacggccggggcgccatcctgctctccgtggct
cgcggcaaagtgtcggaaggcatcgatttcgtgcaccactacggcagagccgtcgtcatg
ttcggggtgccctacgtctacacccagagccgcatcctgaaggccaggctggaatacctc
cgggaccagttccagatccgggagaacgacttcctcaccttcgacgccatgcgccacgct
gcccagtgcgtcggccgagccctgcgcggcaaaaccgactacggcctcatggtcttcgcc
gacaaacgtttcgcccgggcggacaagcgcgggaagctgccgcggtggatccaggaacgc
atcactgacgccaacctcaacctgacggtagacgaagccgtgcaagtcgccaagttcttc
ctgcgccagatggctcagcccttccaccaggaggatcagctggggctgtccctgctgacg
ctggagcagctgcagtcgcaggaggttctgcagcggatcgagcagatcgcacagcaggtc
tga
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