Grus americana (Whooping crane): 129198935
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Entry
129198935 CDS
T11359
Name
(RefSeq) red-sensitive opsin isoform X1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
game04030
]
129198935
G protein-coupled receptors [BR:
game04030
]
Rhodopsin family
Vision
Opsin
129198935
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
TctB
7TM_GPCR_Srt
7TM_GPCR_Srsx
7TM_GPCR_Sru
PRIMA1
7TM_GPCR_Srd
Motif
Other DBs
NCBI-GeneID:
129198935
NCBI-ProteinID:
XP_054664566
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Position
38:229006..231325
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AA seq
395 aa
AA seq
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MAAGWEAAAFAARRRHEDEDTTRDSVFTYTNSNNTRGPFEGPNYHIAPRWVYNLTSLWMI
FVVVASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIASTISVINQISGYFIL
GHPLCVIEGYTVSACGITALWSLAIISWERWFVVCKPFGNIKFDGKLAVAGIIFSWVWSC
AWTAPPIFGWSRWGGPIARGGRDGDGGRARGRPLTPRLPPPPRYWPHGLKTSCGPDVFSG
SSDPGVQSYMVVLMITCCFFPLAIIVLCYLQVWLAIRAVAAQQKESESTQKAEKEVSRMV
VVMILAYIFCWGPYTFFACFAAANPGYAFHPLAAALPAYFAKSATIYNPIIYVFMNRQFR
NCILQLFGRKVDDGSEVSTSRTEVSSVSSSSVAPA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctgggaggcggcggcgttcgcggcgcgccggcggcacgaggacgaggac
acgacgcgggacagcgtcttcacctacaccaacagcaacaacacgcgcggtcccttcgag
ggtcccaattaccacatcgccccgcggtgggtttacaacctgacctcgctctggatgatc
ttcgtggtggtggcttccgtcttcaccaacgggttggtgctggtggccacctggaagttc
aagaagctgcgtcaccccctcaactggatcctggtcaacctggcggtggccgacctgggc
gagaccgtcatcgccagcaccatcagcgtcatcaaccagatctcgggctacttcatcctg
gggcacccgctctgcgtcatcgagggctacaccgtctctgcctgcggcatcacggcgctg
tggtcgctggccatcatctcgtgggagcggtggttcgtggtctgcaaacccttcggcaac
atcaagttcgacgggaagctggcggtggccggcatcatcttctcctgggtctggtcctgc
gcctggaccgcgccccccatcttcggctggagcaggtggggcggccccatagcgcgcggg
gggagggacggggacggggggcgcgcgcgggggcggcccctcaccccacgtctccccccc
ccccccaggtactggccccacgggttgaaaacgtcctgcggccccgacgtcttcagcggc
agctcggacccgggggtgcagtcgtacatggtggtgctgatgatcacctgctgcttcttc
cccctcgccatcatcgtcctctgctacctccaagtctggctggccatccgggcggtggcc
gcccagcagaaggagtcggagtcgacgcagaaggcggagaaggaagtgtcgcgcatggtg
gtggtgatgatcctggcctacatcttctgctgggggccctacaccttcttcgcctgcttc
gccgccgccaacccgggttacgccttccacccgctggcggccgccctgcccgcctacttc
gccaagagcgccaccatctacaaccccatcatctacgtcttcatgaaccgacagttccgc
aactgcatcctccagctcttcggcaggaaggtggacgacggctccgaggtctccacctcc
cgcaccgaggtctcctccgtctccagctcctccgtggcgcccgcgtag
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