Grus americana (Whooping crane): 129199143
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Entry
129199143 CDS
T11359
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
game Grus americana (Whooping crane)
Pathway
game03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129199143 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129199143 (SMARCA2)
03036 Chromosome and associated proteins [BR:
game03036
]
129199143 (SMARCA2)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129199143 (SMARCA2)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129199143 (SMARCA2)
Chromatin remodeling factors
BAF complex
129199143 (SMARCA2)
PBAF complex
129199143 (SMARCA2)
GBAF(ncBAF) complex
129199143 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129199143
NCBI-ProteinID:
XP_054664991
LinkDB
All DBs
Position
Z:30556640..30677196
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTSSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQPGIGLHTMSGAATGP
GPAPAVPGHTTAITPKTWTEGQAPDMSVSNTQQKLPAPPPSGRPSPAPPAAQPAAALPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDDEESSKLESDDKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDE
EEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccatcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagtatgatggggccaagtcctggtccacccagtgtcccgcatccaatgccaacaatg
gggcctactgattatccacaggaaggcatgcaccaaatgcataagtccattgatggcttg
cacgaaaaaggaatggttgaagatgttcattgtggctctatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggatcagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtcccatgtctggaggaggt
ccaactccacctcagatgacttccagccagccaggacccattataccaggagacccacaa
gttatgaatcaacctaacagaggtccttcccctttcagccctgtacagctgcatcagcta
cgggctcagattttggcatacaaaatgttagctagaggtcagcctttaccagaaaacctc
cagcttgctgttcagggcaagaggaccctgcctggtattcagcagcagcagcctcccagt
gccttcaacagacagcctggtattgggttgcatacaatgagtggtgctgcaactggaccg
gggcctgctccagcggtgcctggacatacaactgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaacacgcagcagaagcttccagcacctcccccc
agtgggaggccttctcctgccccccctgctgcccagcctgctgccgccttgcctgggccg
tctgtaccacagccaccgcctggacagccttcgcccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccacaaggactggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggtta
ctgaacttccagcgccagctaagacaagaggtggtagcttgcatgcgtcgtgacacaaca
ctggagacagcactaaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gcccgaatgacagaaaaacttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcatcaggaatacctgaacagcatactgcagcatgctaaagattttaaagagtac
caccgatcggttgctgggaaaattcagaaactttctaaagctgtggcaacctggcatgcc
aacactgagcgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctacctattgcagcagacagatgagtatgtggctaacctgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttgggccagaagcaccaaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagcggctctgaatatgaggag
gaggatgatgatgaagaatcaagcaagttagaatcagatgataagatacttctggatcct
aacagtgaggaggtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagggggtctcagtcctactacactgtc
gctcatgcaatcacagaaagggtagaaaagcagtcttctcttcttattaatggcacacta
aaacattatcagctccagggactggaatggatggtttcactctataataacaatctgaat
ggaattttagctgatgaaatggggcttggaaagacaatacagactattgcactcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcgact
ttatctaattggacgtatgaatttgacaaatgggctccttctgtcgtgaagatctcttac
aagggtacacctgcaatgcgccgctcactcgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacacatccttgctaagattcga
tggaagtacatgatagtagatgaaggccatcggatgaagaaccaccactgcaagctgact
caggtcttgaatactcactatgtggccccaaggcgaatactgctgactgggactccattg
cagaacaaattgcctgaactttgggctcttctcaatttcctcctcccaaccattttcaag
agctgtagcacctttgaacagtggttcaacgctccgtttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtactccgaccc
ttcttgctgagaagattgaagaaagaggttgaatctcaactgccagaaaaggtggaatat
gttatcaaatgtgatatgtcagctctgcagaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaaaaagggaaaaggtggggcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtcctttgctgaacatttaggctactcaaatggtgtcatcaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactgatgaccattatggaagat
tactttgcctttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgctgaagaagttcaatgaacctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttc
gatagtgactggaatcctcaccaggacttgcaggcccaagatagagctcaccgaattggt
cagcagaacgaagttcgagtcctgcggctgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtataagctgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaaatcttcaagccatgaaaggagagccttcctgcaggctatattggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggaccgtcgcagggaggat
gccagaaaccccaagcgtaagccccgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacgtgtgaagaagaagaagagaaaatattc
gggagaggatctcgtcaacgcagggatgtggactacagtgatgctctcacagagaaacaa
tggctgcgggcaatcgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaagattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaaccctcccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagtcttcattcagctcccgtctaggaaagaattaccagagtattatgaattg
attaggaaaccagtggatttcaaaaagataaaggaaagaattcgcaaccataagtatcgg
agtcttggagacttggagaaagatgtcatgttgctgtgtcacaatgctcagacattcaat
ttggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagtgct
cgacagaagattgccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagatgaa
gaagaagaagaagaatcagaatcagaatcaaaatcagtgaaggtcaaaatcaagctaaat
aagaaggacgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
