Grus americana (Whooping crane): 129199195
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Entry
129199195 CDS
T11359
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129199195 (VPS13A)
Membrane trafficking [BR:
game04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129199195 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129199195
NCBI-ProteinID:
XP_054665195
LinkDB
All DBs
Position
Z:42306049..42415998
Genome browser
AA seq
3195 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEARQLLEARQRELQRIEE
AKQKIADQDKVKEEKQDTFVEKLVTQVIKNLQVKITNIHIRYEDDITNRNNPLSFGISLQ
NLSLQTSDKNWNPCLHDETAKLFYKLVRLDNLFAYWNVKSEMFYHGGCDESLVNLKQGVA
SHNVIPEGYDFVFRPISARAKLLMNPRSDVDFSSPKMDLDVNLQDITVELNKPQYFSVME
LLESIDMMTRNLPYRKYRPDVPLHNNAKTWWKYVIYGILEVNVQPKLQMWSWEHIRYHRK
QVKSYKEMYKTKITSKKPNEEILKLLEEFEKALDIFNITLARQQAEVEATKAGLKIYRPG
VKQDDENSGGWFSWIWSWSGEKKDEQKPEVKGSSLEELMTREEKAKLYAAIGYSETAVDP
TLPKSYEAMKFSVKLLSMSISIRENKQSPELVEFALTGLSTVFTQRPGAQAIRFETKITS
LEVTGMSREKCTPCLLSSRTVYSDKSTSLLSIMFETNPLDEKADQRLRIESQPLEIVYDA
MTINSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLKINLMASY
IIVPQKGFYDCMSNLLLLDLGSLKMKSKSRSDLSELKVGQSTIEDIMSRAYDSFDIQLSS
IQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFSRAMVVTDARMPKFKLSGQLPLLSI
QISDQKLTSILELIDSIPKPESAPATSSPPKITEAAISPVLSAPHLSQGVFPVLDLHSFA
ESESEEEFYDALSSPVEDMPFFEAPSGSLKRATSTRRKKLRKQESLKNMTEFQLTFEVAE
VLIKLCRLTGNTETPVLQLDIVGLGTELKLRTFDMTANAFLREVCLLCPEYMDDNDKPVY
IITTLDNIEDDLLTLEYVKADINGPELKTAYQNVLQKIKVNFSSLDVHLHTEALLNAMNY
LNNLLPKQETKVAEELVHEKIEEKKDVLKKLTSKKSKYEDVIDLNICADLSCLRIFIREK
KHRIAEIHIEGLDSQVIMKKAATEVTAKLKNIIIVDSDEMALYKKALYITGKEVFNFRMI
SYVNATDGIAYTNMDVVDNRIYLTVGCIQVVFVNKFVSSILAFINNFQAAKEALTEATVQ
AAEKAATGVKELAERSSRLALDINIKAPVVIVPQSAMSANVLVADLGLITVKNQFFIAKT
KTRYNLPPVVDSMTVKLSELKLYRSCYEQGSLQTEVQLLQPLNLEVAVERNLAAAWYNEV
PDIEISGRLKPMNLILSQEDITTILRTLNENIGGSSGASTSLPEPKDTTSHCSDLHSTSQ
HSAGVTVVTSAVVELHSPMKIKTTLKLDFRFDSLTLVLYSPNSKQVTNLDQRDDLLKLAE
FKLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQSIQKATPRMVEMKHGFEKKVMVDISY
KQGRDGTVLDVIVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLKQSLPLKEQAPVQA
VSTMEMNIVVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQMKAC
PFLPEKRKGNVTTVLQPCDFFFEMKQSGTNPQTADLTIKSLTIKVSPIIINTVITITSAL
YQTAETTEEEISQIPPDLWNKKDIKNLKMWFLEESSENEDTNPTAELVPTGESLKMSIES
VFLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSHLELEVHYFNEMFGVWEPLLEP
LEVEKTDLFKPWILEIKMKKKAKKALVESDAEEENYKVPEYKTVINVSSKDQLNITLSKC
GLQMLSNLGTAFAEAASQTSDIFKKDRAPFVIINSLGLPITVLPSDSFSVLNVEFGAKMF
HLRDGENLNMEFVRTKNESDQFTAMTTLSSKRFYIQIYPHNHSTVEKIPLTKVGRCIYRV
RHEESGVERSIVCQIDTVEGSKMITIRSPIQIRNHFSIPLNIFEEGRCLGTASPENEFNI
PLSSYRSILSLQPLPNENGVDGEYDMCEGITFDEIMKNVDSLLQRKCQSVRSTNHSLIIN
IVPVKDTLTSSLCAEDQWDFPYVVHLWPSVLLRNLLPYQITYSVEGNGNKYDTLQEGCSA
QIHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPDISFTTFYCITELDKTELDIAVHVT
YTTGQMVIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKKPLLFSFQPKNFLQNNKVQL
MVTDSELSDQFSLDTVGSHGSVKCKSHKKEYQVGVTINNSSFNITRIVTFTPFFMISNRS
KYTLEVAEEGKEKWIPLVLQQCIPFWPENDANKLLVRVENSDLPPKKINFDKQENCLLLH
LDNKLGGITVDVNLTEHSTVITFSNYHDGAAPFLLINHTKEEIIEYGQSSLSELEDCLQP
NKAVLYTWADPAGSRKLKWKCGNRTEEITPKEDKMEILSLDCRKVVYLVSFFEGLQRIVL
ITEDENVFKLTYESVKAELAEQEIVLSLQDVGISLVNNYTKQEVSYIGITSSDVVWETKP
KKKSRWRPMSVKQTDKLEQEFKDYCELTPSENKIIELESNVLVCLTPNGMNMKIQQPNEI
PIRRNYLPALKVEYNSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSAP
KPFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLYALVEFFTQTDVPSDQELEL
FKKDVESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNKEERKNELIP
LQSLNLLLKSIGATLTDVQDVVFKLAFFELSYHFCTTQQLQSAVVRHYSKQAIKQMYVLI
LGLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGA
ASRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGLVSGFVSGITGIVT
KPIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKVTDSSEDVISLRPP
RFFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVNSTDLLMVTKSGVLFVTK
GTFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKSPEDAKW
ILSKLEEVRENQPKL
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgagtcgctggtcgtggacgtcctgaatcgtttcctcggcgactacgtggtg
aacctggacagctcccagctgaagctgggcatctggggaggagccgtagcactgaagaat
cttgaaataaaagaaaatgcactgagtcagctggatgtgccatttaaagttaaagcagga
catattggtcaacttaacctacagattccatggcaaaacctttacactcaacctgttgag
gcggttcttgatggagtttatttgcttattgtgcccacagccagcataaaatacgatgcc
gaaaaagaagccaggcagctcttggaagcaagacaaagggaattgcaaaggatagaggaa
gcaaagcagaaaatagctgaccaagataaagtaaaagaagagaaacaagacacttttgtc
gaaaaactagtcactcaggtcatcaaaaatcttcaggtgaaaattaccaacatccatatt
cgctatgaagatgatatcacaaaccggaataaccccttgtcatttgggatttcacttcag
aatctaagtttacagacctcagataagaattggaatccatgtttacatgatgaaactgcc
aaattattctacaagcttgtacgactggataacctttttgcttactggaatgtgaaatcg
gagatgttctaccatggtggttgtgatgaatcgttggttaacttaaaacagggagttgcc
agccacaatgtgattccggaaggttatgattttgtattccgtccaatttcagctagagcc
aaactgcttatgaatcctcgctctgatgttgacttttcatcaccgaaaatggatttagat
gtaaatttacaggatataactgttgaactcaataagccacagtacttcagtgttatggag
cttcttgaatctattgatatgatgactcgaaatctgccatacaggaagtacagacctgat
gttccattgcacaacaatgccaagacatggtggaaatatgttatttatggcatccttgaa
gtaaatgttcaacctaagctccaaatgtggtcatgggaacatattcgctaccataggaaa
caagtgaagagctataaagagatgtataaaacaaagataacatcaaaaaaacctaatgaa
gaaatcttaaaattgttggaggaattcgaaaaggccttggatatttttaacatcactcta
gcaaggcaacaagcggaagttgaggcaactaaggctggattaaaaatctacagaccagga
gtaaaacaagatgatgaaaattctggtggctggtttagttggatatggagctggtcaggt
gaaaaaaaggatgaacaaaaaccagaagtaaaaggttcaagtcttgaagagctgatgaca
cgtgaagagaaggctaaactttatgcagcaattggatacagtgaaacagctgtggatcca
acccttccaaaatcatatgaagccatgaagttctctgtgaagttattaagcatgtctata
tcaataagagaaaacaagcaaagtcctgagctggtagaatttgcattaactggcttgagt
acagtatttacccaacgaccaggtgcacaagcaataaggtttgaaacaaaaattacttca
cttgaagttacaggcatgtcccgagaaaagtgtacaccctgtcttctatcttctcgaacg
gtctattcggacaagagtacctcactcttaagcataatgtttgagaccaatcctttggat
gagaaagcagatcagaggcttagaatagaatcacagccactggaaatagtgtatgatgcg
atgacaataaatagcttagtggatttcttcaggcctccgaaagatgtacatttagagcaa
ttgacatcagcaactctgatgaagcttgaagagttccgtgaaaaaacatcaacaggtttg
ttgtatgttattgaaacccagaaagttctcgacctcaaaattaacctcatggcttcatac
atcattgttccacaaaaaggattctatgactgtatgtcaaatttactacttctggatctt
ggtagtcttaagatgaaaagcaaaagccgttctgatttatcagaactcaaagtaggacaa
agcactattgaagatataatgtcaagggcttacgacagttttgatatccagctcagcagt
atacagttactgtacagcaaacatgatgagaactggcaagaagctcggaagctgaaatat
tcatctcaacatatcttgcagcccttggatgtaaaggtggaatttagcagggctatggtt
gttacagatgcaagaatgcccaagttcaaactgtctggtcagctgcctttactttctatc
caaatatcagaccagaagctgacaagtatcttggagctaattgatagcattcctaagcca
gaaagtgctcctgctaccagttctcctccaaaaataactgaggctgcaatatcccctgtg
ctctcagcaccacatttatcacaaggtgtgtttcctgttttggatcttcattcatttgct
gagtcagaatcagaagaagaattttatgatgctctaagtagtcctgtggaagacatgcca
ttttttgaagccccatctggttccctcaagcgagctaccagtaccaggcgaaaaaaacta
cgtaaacaagagtctttgaaaaatatgacagaattccagctaacatttgaagtagctgag
gtcttaattaaattatgccgtcttactggtaataccgagacacctgtgctgcagcttgat
attgtagggttaggcactgaacttaaattaagaacatttgacatgactgcaaatgctttc
cttcgtgaagtttgtctgctgtgcccagagtatatggatgataatgacaagccagtttac
ataattactactttggataatatagaagatgatcttctcactctggagtatgtaaaggct
gatattaatggaccagaactgaaaactgcctatcagaatgttctacagaaaataaaggtg
aacttttcatctctagatgttcatttgcatactgaagctctgctgaatgctatgaactat
ctgaacaatcttctacccaaacaagaaactaaagttgcagaagaactggtccatgaaaaa
atagaggagaagaaggatgttcttaagaaactaacatcaaaaaagtcgaagtatgaagat
gttatcgacctcaatatctgtgcagatttatcctgtttacgtatctttattagagagaaa
aaacatagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaagaaa
gcagcaacagaagtgactgcaaaattaaagaacatcattattgtggactctgatgagatg
gcattgtataaaaaggctctttacatcacaggaaaagaagtcttcaactttaggatgata
tcttatgtgaatgctacagatggcattgcatatacaaatatggatgttgttgacaatcgt
atttacctgactgtggggtgtattcaagtagtttttgtcaacaagtttgtttcatctatt
ttggcttttataaataactttcaagccgccaaggaagctcttactgaggcaactgttcaa
gcagcagagaaagcagctacaggcgtaaaagagctagcggagcgtagttcccgtttggca
ctagatatcaatattaaagcgccagttgtgatagttccacagtcagcaatgtctgcgaat
gtcctggtggctgatcttggtctaatcactgtgaagaatcaattctttatcgctaaaaca
aaaacacggtataatctcccacctgttgttgactctatgacggtgaaactgagtgaacta
aagttgtacagatcatgctatgagcagggttcattgcaaactgaagtacagttgctgcag
ccactcaatctggaagtagctgttgaacgaaacttagctgctgcatggtataatgaagtt
cctgacattgaaatatctggccgactcaagcctatgaatctaattctcagtcaggaggat
attaccacaatattgaggacactaaatgaaaatataggtggaagctctggtgcatcaaca
tctctaccagaaccaaaagatacgactagccattgtagtgatttgcatagtacttcacag
cactctgcaggtgtaactgttgtgacatcagctgtggtggaactgcattcacctatgaaa
ataaaaacaacactaaaactggacttcagatttgactctctgactttagtattgtatagt
ccaaattcaaaacaggttacaaatttggatcagagagatgaccttttgaagcttgcagaa
tttaagttagttttgatgtcagctgctgtcaaaatgttatcagatggttcaatgaatgct
tcagtcaagctggcaaattgtacattagatgataaaagacagtcaatccagaaggctaca
ccaagaatggtggaaatgaaacatggatttgaaaagaaagttatggtggatataagctat
aaacaggggagagatggcactgttctagatgtgattgttcaagagatatacctttgtgca
agcatggagttcctacttactgttgcagatatattcctgaaggctaatgcagaaagtgct
gctgcacagagaaatctcaaacagtcattacctttaaaggagcaagcacctgtgcaggct
gtatctacaatggaaatgaacattgttgttaaaaatccagagattgtgtttgtggccgat
ttaacaagaagtgatgctcctgcattggtggttacaacacagtgcgaggtcttcattaaa
aatagccctgaaaggtatagcatgacagctgctgttaaagagatacaaatgaaagcatgc
ccatttcttccagaaaaaaggaaaggaaatgttactacggtattacagccttgtgacttc
ttctttgaaatgaaacagtcaggtactaatccacagacagctgatctaacgattaaatct
ctaacaataaaagtttcaccaataatcattaacacagtaattactattacatcagccctt
tatcaaactgcagaaacaacagaagaagaaattagtcaaattcctccagacttgtggaat
aagaaagatataaaaaatctaaaaatgtggtttcttgaagagtcaagtgaaaatgaagat
acaaatccaactgctgaactggttcccacaggagagtcattgaaaatgagtatagaatct
gtttttctaacgcttgaagctggggttggccacagaacagtaccaatgcttttagccaag
tcctcatttcttggagaagtcaaaaactggagtactctaatcaacctacgttctcatctt
gagctagaggtacactattttaacgagatgtttggggtgtgggaacctttgcttgaacca
ctagaggttgagaagactgatttattcaaaccatggattcttgaaatcaagatgaagaag
aaggctaaaaaggcattggttgaatcagatgcagaagaagaaaactacaaagttccagaa
tataaaacagtaataaatgtttcctcaaaagaccagctgaacattactctatccaaatgt
gggctacaaatgttaagtaacttgggcacggcatttgctgaagcagctagtcaaacttca
gacatcttcaaaaaagaccgagcaccatttgtaataataaattctttaggacttcccatc
actgtcttgcctagtgattcctttagtgtccttaatgttgaatttggagcaaaaatgttt
catttaagagatggagagaatttaaatatggaatttgtcagaactaaaaatgagagtgac
cagttcacagcaatgacaactctgagtagcaagaggttttacattcagatatatcctcat
aaccattccactgtggaaaagattccattgacaaaagtgggtcgatgtatttacagagtg
agacatgaggaatcaggtgttgaaaggtccattgtctgccaaattgatactgttgaagga
agcaagatgataactatacgttctcctattcagataaggaatcatttttcaatcccgtta
aatatttttgaggaaggaagatgtttagggactgcttcaccagaaaatgaattcaacata
ccattgtcctcttacagatccatattgagtctgcaaccgctacccaatgaaaatggagtg
gatggagaatatgatatgtgtgaaggaattacatttgatgaaattatgaaaaacgttgac
agtttattgcaaaggaaatgccagtctgtgaggtcaactaaccactcacttatcatcaat
attgttcctgtaaaagacacattgacatcttcattatgtgcagaagatcaatgggatttt
ccatatgttgttcatttatggccctctgttcttctccgcaatctccttccttatcaaata
acttattctgttgagggaaatggcaacaaatatgacactctacaagaaggatgttcagct
cagattcataatgcagtcttggatcaaacaaaactagatttacagttgcttaactatctt
gatcaaaactggaaaagtgaataccatattaaaagcaatctaccggacatcagcttcaca
acgttttactgcatcacagagttggataagactgaactggatattgctgtccacgtgacc
tacacaactgggcagatggttatagcaattcacagtccatactggatggtaaataaaacc
ggtcgaatgttgcaatacaaagctgatggtattcaccgcaagcatcctccagattacaaa
aagccactccttttttctttccagcccaaaaacttcctccaaaataacaaggtgcaactt
atggtaactgacagtgaactgtctgatcagttttcactggacactgttggaagccatggt
tctgtgaaatgcaagagtcataaaaaggaatatcaagtcggtgtcaccataaacaatagc
agttttaatattactagaattgtcactttcactccattttttatgatctcaaatagaagc
aaatacactttggaagtagctgaagaaggcaaggaaaagtggattcctcttgttttgcaa
cagtgcattcccttttggcctgaaaatgatgccaacaaactgcttgttagagttgaaaat
tctgatctccccccaaagaagataaattttgataagcaagaaaactgtctgctgctgcat
ttggacaacaagcttggaggaattacagtggatgttaacctgactgaacattctacagtg
attaccttttctaattaccatgacggtgcagctccatttctgttgataaaccatactaaa
gaggaaattattgagtatggacaaagctccctcagtgaattagaagactgtcttcagcca
aataaggcagtactgtatacttgggcagacccagcgggatctagaaaattgaaatggaaa
tgcggaaacagaactgaggaaattaccccaaaagaggacaaaatggaaatactcagcctg
gattgtagaaaagtggtctatttagtgtcattttttgaaggtttgcagcgtattgtcctg
atcactgaagatgagaatgtctttaaattaacatatgaaagtgtaaaagcagaactagca
gaacaagaaattgttctgtctttgcaagatgttggaatttccttggttaataattataca
aagcaagaggtgtcctacatcggaattacaagttctgatgtagtttgggagacaaaaccc
aagaagaagtcaagatggagaccaatgagtgttaagcagactgataaattagaacaagaa
ttcaaagattactgtgagctaactccttcagaaaataagatcattgagttggaatcaaat
gttttggtatgtttaactcctaatggaatgaacatgaaaattcaacaaccaaatgagatt
cccatcagaaggaattatctgccagctttaaaagtagaatacaattcttctgcacatcag
aagtctttcagaattcaaatttacaggatacagatacaaaaccagattcctggagccata
tttccctttgtgttctatcctattaaacctccaaagtccatcaccttggattcagcacca
aaaccatttactgatgtcagtattgtcatgagaactgcaggacattcacaaatatctcat
attaagtattttaaggtcctcattcaagagatggatctcagattagatcttggcttcctt
tacgcactggttgaattctttacacagactgatgtgccaagtgaccaagagttagaactt
ttcaaaaaggatgttgaatctcttcaagaagaactgatgagtgtgtcatcaatggataca
tcacaaatcagcttgtatgaatactttcacatttctccaattaagttacacttaagcttt
tcactcagtacgggtggagaagatagtaacaaagaagaaagaaagaatgaattgatacca
cttcagtccttgaatctcctgctgaagagtataggggccaccctcacagatgtacaagat
gttgtctttaagttggcattctttgaactcagctatcacttctgtactacacaacagctc
caatcggcagttgtaaggcattattcaaaacaggctattaaacagatgtatgttcttatt
cttggccttgatgtcttgggtaatccatttggattcataagaggcttgtctgaaggagtg
gaagcattcttctatgaaccttaccagggagccatccagggtcctgaagaatttatagaa
ggaatggcgttaggacttaaagcactggttggaggggctgttggtggattagctggtgct
gcatccagaatcactggtgctatggcaaaaggagtagctgcaataactatggatgaggat
taccagcagaaaaggagagaagccatgaataaacagcccactggtctgagagagggtatc
actcgtggcggaaaaggattagtttctggttttgtcagtggcataacaggaatagttaca
aaaccaataagaggagctcagaaagaaggagcagctggttttttcaaaggtgttggaaaa
ggcttagtgggagcagtagctaggcccactggaggaatcatagacatggcaagcagcacg
tttcagggtattaaaaaagttacagattcatcagaagatgtgataagcctgcgcccacct
cgcttctttggtgaagatggagttattagaccttacagattaagagatggaactggaagt
caaatgttacagaaaattgaaaacggaagatttgcaaaactcagatatattgcacatgct
atggtcaacagtacagatctgttaatggtaacaaaaagtggtgtgctgtttgtgacaaaa
gggacatttggacagctgacatgtgaatggcaatacacttatgatgaatttaccaaagaa
ccattcattgttgatggcagaagattacgcattgaagccaaggaacgagttaagtctgtg
ttccacgccaaagaatttggaaaaattattaattttaaaagtccagaggatgctaagtgg
atcctttctaaactggaagaagtgagagaaaatcagccaaaattgtaa
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integrated database retrieval system
