Grus americana (Whooping crane): 129199398
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Entry
129199398 CDS
T11359
Symbol
UTP15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
game Grus americana (Whooping crane)
Pathway
game03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129199398 (UTP15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
game03009
]
129199398 (UTP15)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129199398 (UTP15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_ACSF4
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_HPS5
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_WDR41
KNTC1_N
BBS2_Mid
WDR54
Beta-prop_EIPR1
Beta-prop_LRRK2
TRM82_WD
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_At4g14310
Salt_tol_Pase
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
129199398
NCBI-ProteinID:
XP_054665827
LinkDB
All DBs
Position
Z:complement(28859549..28869882)
Genome browser
AA seq
520 aa
AA seq
DB search
MATYKPVVVQAFPKLGERITQDTVYWRGYKTPVQIKEFGAVNKIDFSPVPPYNYAVTASS
RIHIYGRYSQEPIKTFSRFKDAAYCATYRDDGNLLVAGSEEGSIRLFDVSGKAPLRQFNG
HTKAVHVVGFLSDKYRIFSGGDDYSSSLWDIPSATEIVSYSEHTDYVRCGCASKVNADVF
VTGSYDHTVKLFDARTKSSVLTIEHGQPVESVLLFPSGGLLVSAGGRYVKVWDVLKGGQL
LVSLKNHHKTVTCLCLNSSGQRLLSGSLDRHVKIYSTTSYKVVHSFNYATSILSLALSPE
DETIVVGMTNGVLNVKHRKPEERKEKSQKRRQPAYRTYVKGRTYMPKQEDFCVSKPVKRV
LRKYDKLLKSFQSSKALDAVLEPPIRLYTPEVTVAVMQELHRRGTLRSALAGRDEKQINL
LLTFVARRVIEPRFTPVLVTVADMITDIYQPVVGQSAIVDRQFLRLQEAIGKEIDYQEEL
LEVLGMMDTLFATFTKKRATYLEENKSNGLTETIEMNINN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtacaaaccggtggtggttcaggcgttccccaagctcggggagaggatcacg
caggacacggtgtactggcggggctacaagacacctgttcagataaaggaatttggtgca
gtaaataaaattgacttctcccctgttcctccatataactatgctgtcacagcttcctca
aggatccacatttatggtcgttactctcaggaaccaatcaaaacattttctcgcttcaaa
gatgctgcttattgtgccacatacagagatgatggcaatctgcttgttgctggcagcgag
gaaggtagcattcgcctctttgatgttagtggaaaagcaccactgagacaatttaatggt
cataccaaggctgttcatgtagtgggcttcttgtctgataaataccgaatattttctggt
ggtgatgattattcatcaagtttgtgggatattccaagtgctacagaaatcgtctcatac
agtgaacatactgactatgtgagatgcggctgtgcaagtaaagtgaatgcagatgtcttt
gtaacaggttcctatgatcacactgtcaaactatttgatgcacgaacgaaaagtagtgtc
ttgacaatagaacatggccagcctgtggaaagcgtgcttctgttcccttctggtgggctt
ctagtatctgcaggaggtcgatatgtcaaagtttgggatgtactaaaaggcggacaatta
ctagtttcacttaaaaatcaccataaaactgtaacatgtttatgcctgaacagctctgga
caaaggttattgtcaggatccctggacaggcatgtgaagatctacagcactacttcctac
aaagtagtccacagctttaattatgcaacatccatcctcagtcttgcattgtcgcctgaa
gatgaaaccatagttgtaggcatgaccaatggggtactaaatgttaaacacagaaaaccc
gaagaaaggaaggaaaagtctcaaaagaggagacaaccagcatatagaacctatgtgaaa
ggaagaacttacatgccaaaacaggaagatttctgtgtcagtaaacctgtgaaacgtgtt
ttgaggaaatacgacaagctgctgaagagctttcagtcttccaaggcccttgatgcagta
ctggagccacccatcagactttatactcctgaagttacggttgcagttatgcaggagcta
catcgcagaggaacactgaggagtgcgcttgcaggccgagatgagaagcaaattaatctc
cttcttacctttgtggcaaggcgtgtgattgagcctagatttactcctgtactggtgact
gttgcagatatgatcactgacatttatcagcctgtggttgggcagtcagcgattgttgat
aggcaattcttgagacttcaggaagccataggaaaagagattgactatcaagaggaacta
ctagaagttttgggcatgatggatacactgtttgctacttttactaagaaaagagctact
tacctagaagagaacaaaagtaatggtcttacagagaccatcgaaatgaatatcaataac
tga
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