Grus americana (Whooping crane): 129199464
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Entry
129199464 CDS
T11359
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
game03400
]
129199464 (SMC5)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
129199464 (SMC5)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_25
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
129199464
NCBI-ProteinID:
XP_054665956
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All DBs
Position
Z:complement(41582669..41641760)
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AA seq
1072 aa
AA seq
DB search
MAVAASGKWSLGGCQLGAGGSQRAVRSTEARPRFVEGSIVRIFMENFLTYDVCEVRPGPS
LNMIVGANGTGKSSIVCAICLGLAGKPSFIGRADKVALFVKQGCLKGVVEIELSKTPDNI
IITREIQVVNNTSTWFINRKPTTLKTVEEQIAALNIQVDNLCQFLPQDKVGEFAKLSKIE
LLEATEKSIGPPGMYQFHCELKNFREKERELENLCRDKTNSLEKMKQRIERYKQDVERYH
ERKRHLDLIEMLERKRPWVEYENVRQQHEEVKQRRDQAKEELKNLKEMQSPVTKKIQETE
EHFKSLDMKIRDKAAEIKDTSQKCKQKQDSLEMKDKQIEEINQALRMKKDEEMDRQRKIH
NTHKMIEDWKNELDKMVVCENLQPQTDAVNNELKKLQEERANIDSDISDLTAEKMNQERE
KNRLIDRLGQLNNIMNMKEENLKGRFRDTHTALMWLRKNKDKFKRKVCEPIMLEINMKDN
RHSKYVENHISANDMRAFVFESQEDMEMFLVEMRDHQKLRVNAVCAPAESCAESLPSRPI
EELHRYGFFSYLRELFDAPHPVMSYLCSNYRVHDVPVGTEKTRNMIERVIQETKLKQIYT
AEEKYIVKVSAYTNLTLSTNISLRAAQFLTSSVDTDERRQLENQQQDINNMLKSLDMRLT
TLLERQKHLERRDNELRQQKKELLERGNRRRQLESKIGVKYDSLRQLEQDAINLEKESQL
ANVKIKEINTEKAKLVTELMHLIKNCISLNILKADLVLQSATVAAEKSRLESEYKAASVQ
LRAAEQQFHELDDRKRVLTENCKELLKKARQVCKLSPDQYLPKEFQTAFQALPTTLEEID
AFLNEEKNRASCFTGLNASVVEEYNKQTQEIQQLTDYLEEKKNELDNYKQNISQVKERWL
NPLKKLIEQINEKFSNFFSSMQCVGEVDLHVENEEEYDKYGIRIRVKFHSSTELHELTPY
HQSGGEKSVSTMLYLMALQELNRCPFRVVDEINQGMDPMNERRVFEMVVKTACKESTSQY
FFITPKLLQNLTYNDKMTVLFVYNGPFMLEANKWNLKAFCRRRRRLGRMDEQ
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggcgtcagggaaatggagcctgggcggctgtcagctgggagccggcggc
agccagcgggccgtgaggagcaccgaggcgcggcctcgcttcgtcgaggggtctatcgtt
aggatcttcatggagaacttcctaacatacgatgtctgtgaagtacgtccaggacccagt
ctgaacatgattgtaggtgctaatggaacaggaaagtcaagcattgtttgtgccatctgc
ctgggactggccggaaaaccttctttcatagggcgagctgataaggttgctctctttgta
aagcaggggtgcttgaaaggtgtagtagaaattgaactatctaagacacctgacaatatc
attatcacacgtgagattcaagtggtgaacaacacatcaacgtggtttatcaacagaaag
ccaacaaccctgaaaacagtagaagaacagattgcagccttaaacatccaggtggacaat
ttgtgccagtttcttcctcaggacaaagttggagaatttgcaaaactgagtaagattgag
ttgcttgaagccactgaaaaatccattggtcctccaggaatgtaccaatttcactgtgaa
ttgaaaaacttcagagagaaggaaagagaactggagaacttgtgcagagacaaaactaac
tctttggagaaaatgaaacagaggattgaacgatacaaacaagatgttgagagatatcat
gaacgcaagcgccatcttgatttaattgagatgcttgagaggaaaaggccttgggtggaa
tatgaaaatgttcgtcagcagcatgaggaagtgaaacaacgccgagaccaagccaaggaa
gaactgaagaatctgaaagaaatgcagtccccagtgacaaaaaaaatccaagaaactgaa
gaacattttaagagtctggatatgaaaatcagagataaggctgctgaaatcaaagacact
tctcagaaatgtaaacagaagcaagattctttggagatgaaagataaacaaattgaagaa
attaatcaagctttgagaatgaaaaaagatgaagaaatggacagacagaggaaaatacac
aacactcacaagatgatagaggactggaagaatgagctcgataaaatggtagtctgtgag
aatcttcagccacaaactgatgctgttaataatgagctgaaaaaattacaagaagaaaga
gcaaatattgatagtgatatcagtgatctaacagcagagaaaatgaaccaagagagggaa
aagaacagattaattgatcgccttggacagcttaataatataatgaatatgaaggaagag
aatcttaaagggagatttcgagacacacacactgctcttatgtggctacgaaagaacaaa
gacaagtttaaaagaaaagtttgtgaacccattatgcttgaaatcaatatgaaagacaac
agacattctaaatatgttgaaaatcacatttcagccaatgacatgcgggcttttgttttt
gaaagtcaagaagatatggaaatgtttcttgttgagatgcgtgatcatcagaaactaaga
gtgaatgctgtatgtgcacctgctgaatcatgtgctgaaagcttaccttcgagacctatt
gaagaattacaccgatacggatttttctcatatttacgagagttatttgatgctcctcat
cctgtgatgagttatctttgctccaactaccgtgttcatgatgttcctgtgggaacagag
aagaccagaaacatgattgaaagggtcatacaagaaaccaaacttaagcaaatatacaca
gcagaagaaaaatacattgttaaagtatctgcttacacaaacctaaccctctctactaac
atatccctgagggcagcacagtttctcactagttcagtggatacagatgaaagacgacag
ttggaaaaccagcaacaggacatcaataacatgttaaagtcattggatatgcgtttgact
acattgcttgagagacagaaacatctggaacgcagagacaatgagctcaggcaacagaag
aaggagcttttagagagaggaaacaggaggagacagttggaatcaaaaattggtgtgaag
tatgatagtttaagacagctggaacaagatgctatcaacctagagaaggaatctcaactg
gcaaatgtaaagatcaaagaaataaatactgaaaaagcaaaacttgttactgaattaatg
catctcataaagaattgcatatcactgaacatcctcaaagcagatttggttcttcagagt
gctacagtggctgctgagaagagcagactagaatctgagtataaagctgcaagtgtacag
ctaagagctgcagagcaacaatttcatgaactggatgataggaagcgagttcttacagag
aactgcaaggaattgctgaaaaaagctcgacaggtctgcaaactgagtccagatcagtat
cttccaaaagaatttcaaactgcttttcaggctcttccgaccacgttggaggaaattgat
gcttttctgaatgaagagaaaaacagggcctcctgtttcacaggcctgaatgcttcggtt
gttgaagaatacaataagcagacacaagaaatacagcagttgacagactatctagaggaa
aagaaaaatgaactggataactataagcaaaacatttcacaggtcaaagaaaggtggcta
aaccccttgaaaaagctgattgagcaaattaatgagaagttcagtaacttctttagttct
atgcagtgtgttggtgaagttgatcttcatgtggaaaatgaggaggagtatgacaagtat
gggattcgcattcgagtcaaattccacagtagcactgaacttcatgaattgactccatat
catcagagtggaggtgagaaaagtgtttccactatgttgtacctgatggctctacaggaa
ctcaacagatgtcctttcagggttgtagatgaaataaaccagggaatggatccaatgaat
gagagaagagtttttgaaatggttgtgaaaactgcttgtaaagaaagcacatctcagtac
ttctttattacaccaaagctcctgcagaatcttacttacaatgacaagatgacagtgttg
ttcgtctacaatggaccttttatgttggaggcaaacaaatggaatttaaaggctttctgt
aggcggcggcggcgacttggaaggatggatgaacagtga
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