Grus americana (Whooping crane): 129199791
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Entry
129199791 CDS
T11359
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
game Grus americana (Whooping crane)
Pathway
game03013
Nucleocytoplasmic transport
game03015
mRNA surveillance pathway
game03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129199791 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
129199791 (NCBP1)
03015 mRNA surveillance pathway
129199791 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
game03019
]
129199791 (NCBP1)
03041 Spliceosome [BR:
game03041
]
129199791 (NCBP1)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129199791 (NCBP1)
Spliceosome [BR:
game03041
]
Common components
Common spliceosomal components
Cap binding complex
129199791 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
C24B10_03
Vfa1
Motif
Other DBs
NCBI-GeneID:
129199791
NCBI-ProteinID:
XP_054666790
LinkDB
All DBs
Position
Z:71367022..71398844
Genome browser
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDSMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagaggcggaggacg
tcggagccgtcggagatcgaggaaaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacttggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactatgtactgttgcacgtctgttaccagaa
aagcttactgtttacacgacactagttgggttgctgaatgccaggaactacaattttggt
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtcaatatgtat
aatgaagctgtgcatttagttcgttttctgtctgatcttgtgaattgtcatgtaatagct
gcaccttcgatggtagctatgtttgagaattttgtgagtgtgacacaggaagaagatgtt
ccccaagtacgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtctcagacagaaagc
tatttgaaacgccgccagaagattcatgtacccatgctgcaagtttggactgctgataaa
ccacatccacaagaagaatatttagactgcctttggtctcagattcagaagttgaaaaaa
gaccgttggcaagaacgacacattctgaggccctacttggcttttgacagcattctttgt
gaggcgctgcaacacaatctgcctccgttcactcctccgcctcacactgaagattcagtc
tacccaatgccaagggttatttttaggatgtttgactacacagatgaccctgagggccct
gtcatgcctggcagccactctgttgaacgatttgtaatagaagagaaccttcactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccccttgaactaccacatagtagaggtaatatttgcagaattgtttcaa
cttccctctccaccacacattgaagtcatgtacacaacactcctgattgaactgtgcaaa
cttcagcctggctctttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggattcaatgaatacaacatgtgtggacagatttattaactggttttctcaccacttg
agcaactttcagttccgttggagctgggaagattggtcagattgtcttactcaggacctt
gaaaagcccaaacccaaatttgtgagagaggttttggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatatggagatgaaagtaatcggtctcttcctggatatactgtggca
ctctgtttaacaatcgcaattaaaaataaggccagtaatgatgaaatcttcagcatttta
aaagatgtgcctaacccaaaccaggatgatgatgatgatgaaggatttaccttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtctttcagccac
tccttcagtgccctggcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgag
gggaaactccatgttctgagggttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgcagtagcgaac
tggatcttctcttcagagcttgcacatgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgttctgaagattcacaaagaactggaggag
actaaggcaagattggccaggcagcacaagagacgagatagtgacgatgatgatgatgac
gatgaccgaagcagtgatcgggaagatggaccactagaggagcagatagagcgcttgcag
gagaaagtagagtcagcccagagcgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaactgagcacttagtgcgctgtgaaactggtggaattgatgtgttt
acaccttggtacaagagctgtatagagaggctgcagcagatcttcctgcagcatcaccag
ataatccagcagtacatggtgaccctagagaacctcctctttacagctgaactggaccat
cacatactggccgtgtttcagcagttctgtgctctgcaggcctga
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