Grus americana (Whooping crane): 129201918
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Entry
129201918 CDS
T11359
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
game03016
]
129201918 (LCMT2)
Enzymes [BR:
game01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
129201918 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
129201918 (LCMT2)
Transfer RNA biogenesis [BR:
game03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129201918 (LCMT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Beta-prop_TYW4
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Motif
Other DBs
NCBI-GeneID:
129201918
NCBI-ProteinID:
XP_054669859
LinkDB
All DBs
Position
1:219780936..219807704
Genome browser
AA seq
684 aa
AA seq
DB search
MGRGSPGAPRPAAVQGTGGSSAVSKCSAAARGYIQDRFLRLLVGRRRRRRAPLVHRGYYI
RARAVDHCVQDFLLKTQSHPRTQILSLGAGFDSLYFRLKDMGLLHHTVVYEVDFPNVACQ
KATLIKRMKELSALVGDTGGEGLGVITFSGEDYKLLGVDLSELSELERALEEAGLDNEIP
TLFIAEVVLTYMENSRSDALIQWAAEHFSQACFLLYEQMHPEDPFGRVMQQHFSQLNSAL
HSLAQYPDCEAQQRRFFEKGWTECSVMDMNEFFTCCTPEDEQQRVQALEPFDEYEEWHLK
CSHYFVLTASNGMEPSWTPLLSNMTVPRRDGPVRMAGSITAAVCAVHSEISGLRRYGHYS
VLIKPNVILTTGGFGDEDGQHCRMRNFHVLIKHAGYWKAGCVKKENPAKRWEERLYHTVS
CLSNSLALVVGGRTSPSSAGLGMLWLKFPETCNASDPGDITVELVSLQPAAEPAALRWRH
TTTEVIFQGEKYLFLYGGRSATEPVLGDWYFLHTQELSCTVIPVEGPVPESRHSHSACSW
KGGVLIAGGLGAAEQPLGSVFFLRELEHGFQWQTVETQPPLIPRYSHTAHVHDGKLLLVG
GVWFHSSSVPGVTVIDLMTGLCLDYMINVEHLEWPLMLHNHSSVLLPNEKELLLIGGGGN
CFSFGTHLNPEPVSLSLSNILTSN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgggagtccgggcgccccacgccccgccgccgtccagggcaccggcggcagc
agcgccgtcagcaagtgctcggcggcggcgcggggctacatccaggaccggttcctgcgg
ctcctggtggggcggcggcggcggcggcgagccccgcttgtccaccggggttattacatc
cgtgcccgtgctgtagatcactgtgttcaagacttcctgctgaagacccaaagccaccct
aggacacagatcctgtctttaggtgccggctttgactccttatacttccgtttgaaggac
atgggtcttctgcatcacactgtggtatatgaggtggatttcccaaatgtggcatgtcaa
aaagctactctgatcaaaagaatgaaagagttgtcggcactggtgggagatactggaggg
gaaggattaggagtaattaccttttctggagaggattataaattactgggagtggattta
tcagagctgtctgagttggagagagccctggaggaagcaggactggacaatgaaatcccc
accctcttcatagcagaggtggtgctcacctacatggaaaatagcaggtcagatgccttg
atccagtgggcagcagagcatttctctcaggcgtgctttctgctgtatgagcagatgcac
ccagaggacccctttggacgtgtcatgcagcagcattttagccagctgaactctgcactt
cattctttggcacagtaccctgattgtgaggcacagcagaggcgcttttttgaaaagggc
tggactgagtgcagtgtcatggatatgaatgagtttttcacctgttgtactccagaagat
gagcagcaaagagtgcaggctctggagccttttgatgaatatgaggaatggcatctgaaa
tgttctcattactttgttttgactgcatcaaacgggatggaaccttcctggactccattg
ttatccaatatgacagttcctcgtcgtgacggtcctgtcaggatggctgggagtatcact
gcagcagtgtgtgcagtgcactctgaaatttctggactgagacgttatggtcactactct
gtgcttataaaaccgaatgtgattctcaccactggaggctttggggacgaggatggacag
cactgccgtatgagaaattttcatgtgctaattaagcatgcaggctactggaaagctggg
tgtgtgaaaaaggaaaatcctgctaaaagatgggaggagcggttgtaccatactgtgtca
tgtctctcaaacagtctggccctggtggtaggaggacgaacatccccatcaagtgcaggc
ttgggaatgttgtggctaaagttccctgaaacctgtaatgcctcggacccaggtgacatt
acagtggagcttgtaagtctgcagcctgctgctgaaccagctgctttgcgttggagacac
actacaactgaagtgatattccaaggtgagaagtacctgtttctgtatggtggccgctct
gctacagagcctgtgctaggcgattggtatttcctgcacactcaagaactttcctgcact
gtgattccagttgagggtccagtaccagaaagccgtcactctcacagtgcctgtagctgg
aaaggaggagtgctaattgcaggaggtctgggagcagctgagcagcccttaggttcagtt
ttctttctgagggagcttgaacacggcttccagtggcagacagtagagacacaacctcct
ctcatcccaaggtattcacatactgcccatgtgcatgacggaaaacttctgcttgttggt
ggagtgtggtttcactcatcctctgtgccaggcgtcactgtcattgacttaatgactggt
ctctgcttggactatatgattaatgtggagcatctggagtggccattaatgctacataat
catagtagtgtccttctgccaaatgagaaggagttgttgcttattggtggtggtggtaac
tgcttctcctttgggacacacctgaacccagagcctgtctcattgagcctcagcaacatc
ctgaccagtaactga
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