Grus americana (Whooping crane): 129202148
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Entry
129202148 CDS
T11359
Symbol
SMARCD3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
game Grus americana (Whooping crane)
Pathway
game03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129202148 (SMARCD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129202148 (SMARCD3)
03036 Chromosome and associated proteins [BR:
game03036
]
129202148 (SMARCD3)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129202148 (SMARCD3)
Chromosome and associated proteins [BR:
game03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129202148 (SMARCD3)
PBAF complex
129202148 (SMARCD3)
GBAF(ncBAF) complex
129202148 (SMARCD3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIFT
SWIB
SWIB_eIF2D
TFIIA
Motif
Other DBs
NCBI-GeneID:
129202148
NCBI-ProteinID:
XP_054670298
LinkDB
All DBs
Position
2:169392655..169503656
Genome browser
AA seq
468 aa
AA seq
DB search
MVETGNLLERPGMPSGARMPHQGAPMGPPGPPYVGSPSVRPGMPQTVMETTRKRTAPQQV
QQQQVQQQVQQQQQATQNRTRSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQT
IMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKSDADDSDGSIASWELRVEGKLLDDLS
KQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLM
LDYQPPQFKLDPRLARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF
DCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKGQMSSF
LLSTANQQEITALDNKIHETIESINQLKIQRDFMLSFSKDPKGYIQDLLRSQSRDLKVMT
DVVGNPEEERRAEFYHEPWSQEAVSRYFYCKIQQRRQELEQSLGVRNT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaacggggaacttgctggagcgacctgggatgccatcaggagctcgaatgccc
catcagggggctcccatgggtcccccaggccctccatacgttggaagcccctcagtgcga
cctgggatgccccagactgtgatggaaacaacaagaaaacgcacggcaccgcagcaggtc
caacaacagcaggtgcagcagcaagtgcaacagcagcagcaagccactcagaaccgaact
aggagtgccaagaggaggaagatggctgacaaaattctccctcagaggatccgggagctg
gttcctgagtcccaggcctacatggacctgttggcctttgaacgcaaactagaccagacc
attatgcggaagcgtgtggatattcaggaagcgctgaagaggccaatgaagcaaaagcgg
aaactgagactttacatctccaacacatttaatcctgcaaaatctgacgctgatgactct
gatggcagtattgcttcatgggagctgcgagtggaggggaagctcctggatgacctcagc
aaacagaaacggaaattttcatctttttttaagagtttggttattgaactggacaaagat
ctttatggacctgacaaccatcttgtggagtggcacagaactcccacaacccaggaaacg
gatggcttccaggtgaaaagacccggtgatgtcagtgtgcggtgcacattactcctcatg
ttggactaccagcctccacagtttaaactggacccacgattagcccgtttgctggggata
cacacgcagacccgatcagccatcatccaggctctctggcagtacatcaaaacaaataag
ctgcaagactcccatgataaggaatacattaactgcgacaagtacttccagcagatcttt
gactgtccacggctaaagttttctgaaattcctcagagactcactaacctgctgctacca
ccagaccctatagtgataaaccatataatcagtgttgaccccaacgatcagaagaagacg
gcttgttatgacatagatgtagaagttgaagacccattaaagggacagatgagtagtttt
cttctctcaacagctaatcaacaagagattacagcattggacaacaagattcatgagaca
attgaatccataaatcagttaaaaatacaacgtgatttcatgctgagtttctccaaagat
cccaaaggatacatccaagaccttctccggtcccaaagtagggatcttaaggtgatgact
gatgtagttggaaacccagaggaagaacgcagagctgaattttatcatgaaccatggtct
caagaggctgtgagcagatatttctactgcaagatccagcagcgccggcaggaactggaa
caatctctgggagtgcgcaacacataa
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