Grus americana (Whooping crane): 129202286
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Entry
129202286 CDS
T11359
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
game Grus americana (Whooping crane)
Pathway
game04621
NOD-like receptor signaling pathway
game05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
game00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129202286 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129202286 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
game04054
]
129202286 (NOD1)
Pattern recognition receptors [BR:
game04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129202286 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
WHD_NOD2
LRR_4
AAA_22
AAA_16
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
129202286
NCBI-ProteinID:
XP_054670747
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All DBs
Position
2:complement(122944027..122974590)
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AA seq
951 aa
AA seq
DB search
MEGQLCPNLEISVKETLGASPPSFIALLKVYRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFIHVLQKVTDAYYELQPWLEEIGYEPSENI
CSKPVVNTDPVSRYCQKLRHELGRDSKFVMSYAQREEMLLEEIYSKSIMELVSFTNESIG
EVCQLEALFDDALGLINEDGETIYVFGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SNVPEICSPNEPIHPLVLLVSLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSRN
NLKEYTAMFFKDEGQRTLVLNQLEANPNLCSLCSVPLFCWIIFKCYEHFHSMFDSHELPD
CSVTLTDVFLLMIEVHLNRSLKTSLLKNNTRSQAETFKSRKETLLALGKMAYKGMENSFF
IFEQEEVSSAKISEEDLQLGFLRTVKGYSSYDNQSTYEFLHLTLQSFFTALFLVIEEKVG
AKELLQFFNECSSTETAQPICLRIPWLKKQLAGEDPFRNNEHFHFTNLFLCGLLSRSKQK
LFRHLVLPAVIKRKRKTLITYLGESMKSHLRGLTRARLANYNQIQVQPNFVWMLRCLYET
QSEKVGKLAAKHMHANYIKLTYCNAYSADCSAISFVVHHFQKRLALDLDNNNINDYGVKE
LLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVTFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEAMQHNNSVKIFWLTKNEMDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtcctaacttggagatttctgtgaaagaaactctaggagcaagt
cctccatccttcattgctttgctgaaggtataccgagaacttctggtcagtagaatccga
aacacgcagtgtttgattgacaacttgattaagaatgactacttctccactgaagatgca
gagattgttgtccaatttccaactcaagcagacaaggttcgcaaaattctagacttggtt
cagagcaagggagaagaagtctcagaatatttcatccatgtcctgcagaaagtcactgat
gcttactacgaacttcagccttggctggaggaaataggttatgagccttcagagaatatt
tgtagtaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagtttgttatgtcatatgctcagagggaagagatgctgctc
gaagaaatctactctaaaagtatcatggagctggtcagttttaccaatgagagtataggt
gaagtgtgccaattagaagccctttttgatgatgcacttgggctaattaatgaagatgga
gagactatttatgtctttggtgatgcaggaattggaaaatccatcttgctgcaaaagata
caaagcctttgggccagaaaagaattggacataggagccaaatttttcttccgtttccga
tgtaggatgtttagttgctttaaggaagatgaagccatatgtttgaaagacctactcttc
aaatataattgctaccccgaccaagaccccacagaggttttccatcacattttgcaattc
cctcatacagttcttttcacatttgatggcttcgatgagatctattccaactttgatctc
agtaatgttcctgaaatatgttcacccaatgaacccatccaccccctggtgctgctggta
agccttctcagaggaaagcttcttaaaggatccaagaaaattcttacagcgaggacagga
actgagatccaaagaaatatcattagaaagaaagtgttgctccgtggtttctccagaaat
aacctgaaggaatacactgccatgtttttcaaagatgaggggcaacgaacactggtattg
aaccagttggaagctaaccccaatctctgcagtttgtgttcagtgcctttattttgttgg
attatcttcaaatgctatgaacacttccattccatgtttgacagccatgagcttccagac
tgttctgttacattgacagatgtatttttgctcatgattgaagtccatctgaaccgatct
ctgaaaacaagtttgctgaagaacaacaccaggagccaagcagagacattcaaatcaaga
aaggaaactcttctagctttgggtaaaatggcatacaaagggatggagaactctttcttt
atcttcgagcaggaggaggtctcatcagcgaagatctctgaagaagatttgcaattgggc
tttctcaggacagttaaaggttacagcagctatgacaatcagtctacttatgagttcttg
cacttaacccttcagtcttttttcacagctttgttcctggttattgaagagaaagtgggt
gccaaggagttacttcagtttttcaatgaatgttcttccactgagactgcccagcctatt
tgccttcgtattccttggttgaagaaacaactagcaggggaggatccgttccgaaataac
gaacactttcattttaccaacctgtttctttgtggcctgctttctagatccaagcagaag
ctcttcagacatttagttttgcctgcagtcattaagaggaagagaaagacgctcattaca
taccttggggagagcatgaaatcccacctgagaggcctcactcgggccagacttgcaaac
tacaatcagatccaggtccagcccaactttgtttggatgctgaggtgcctttacgagact
cagagtgagaaagtggggaagttggctgccaaacacatgcatgccaattacatcaagctc
acatactgcaatgcctactctgctgactgcagtgctatttcctttgttgtgcaccacttt
caaaagcgcctggctctggatttggacaacaacaatatcaatgactacggagtaaaagag
ctgctaccatgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagat
catggagtaaggatcttgtatgaagaactctccaagtaccaaattgtgactttcttgggg
ttatacaacaatcaaatcactgatgttggagccaaatatgttgcaaaactaattgaagag
tgttcaagccttgaatatgttaaaataggagcaaacaaaataactagcgaaggaggaaag
tgccttgcccaggccatccagaagagcaagacaatgtttgaaatcgggatgtggggtaat
caagttggagacgaaggagcaaaggcatttgcagaggccctgaggaaccaccccaggtta
acaaacgtgagtctcgcattcaacggcatcacgacagagggaggcaaaagtattgctgaa
gctatgcaacacaacaactctgtgaaaatattctggttgactaaaaacgagatggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtgaagtacctcagcgaagctctcaaggag
aacacggctattaaagaagtctgtttgaacgggaacctgataagccaagaagaggccaaa
gcttttgaaaatgaagaacggatcatttgcttttga
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