Grus americana (Whooping crane): 129202724
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Entry
129202724 CDS
T11359
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129202724 (VPS50)
Membrane trafficking [BR:
game04131
]
Protein recycling
Others
EARP complex
129202724 (VPS50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
129202724
NCBI-ProteinID:
XP_054672111
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All DBs
Position
2:complement(142909385..143006565)
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPSKEELRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDIGHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDPDEAAAVSSV
SDGSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETED
VLASNGYESDEQEKSGYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DTFESTGLGLSSSRLRTTLNRIQESLIDLEVSADATGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagccctattgaaagctttcggattcctagtaaggaggagctcagagaacta
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaagtatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggcttcttgcaaat
caaaggaagcggcagttacttattggactcctgaagtctctgagaacaataaaaacactg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggactatccgggagctatt
cagctgtgtttggaatgccagaaggctgccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggagcaattggatgtagca
ctctccaaaatatgcaagaactttgatataggtcattatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccaattacacatgcacttcactcaagcc
attcataacactgtgtttcaagtagtgcttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgcacacatattacatcagacagc
tacattccatgccttgctgatctctgcaaagctctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgaaaatcatgacccagatgaggcagcagctgtgtcttctgtt
tcagatggcagcaatgtgattggaactgaagagaacagttttgaccgcagctatgtaaaa
aagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaaca
tatcttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgtacttgat
gttatcagcaggttgatgcaagttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagtgttaactatttcaaaacataccacagaacccgtctt
gaagaattaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattctgcagcttcatgaatttaagttcatggagcagtcacgttccccgtctgtg
tcacctagtaagcagcctgcttcagcaatttcaacaacagtgacgttatttgaacagtac
tgtaacggaggaaacccctttgaaattcaggccgacagcaaagatgatgagacagaagac
gtgttagcttccaatgggtatgaatcggatgagcaagaaaaaagtggatatcaagagtat
gatagcgacagtgatgttcctgaggagttgaaaagagattatgtggatgagcagacagga
gatgcccctgtgaaaagtgtttctcgagaaactctgaggagcagaaagagatcggattat
aacctcaataaagtgaatgcacctatcctaacaaatactacgctgaatgtaataaggctt
gttggaaaatacatgcagatgatgaatattctgaaaccaattgcatttgatgtgatccac
ttcatgtcacagctcttcgattactatctgtatgcagtctatacgttttttggccgaaat
gacacgtttgaatcaacaggactgggcctcagtagcagcagattacgcaccacactgaac
agaatccaggagagtctgattgatctggaggtctctgctgatgccacaggcactctcaca
gctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctcgtagttttg
acatctggcaattcgctgtatggtttggcagagagagtggtggccacggaatccttggta
tttctggctgagcagtttgaatttcttcagcctcatcttgatgcggtgatgccagctgcc
aagaagccttttcttcagcagttctattcccagacagtgtcaactgctagtgaactacgt
aaaccagtttattggattgttgctgctaaagctattgattatgaacaaatgctgcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtagat
gctcttttaaaggaattcgaagaatttaacagaaggttgaatgaggtgtctaagagagtc
cgtattccactgccagtctccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtgaagaagtgcagcaatgaaggacgtgccttgatg
caactggactttcagcagttcttaatgaaactagaaaagttaacagacatcaggcctatt
ccagataaagaatttgtggagacctacattaaagcctactacctgacagaaaatgacatg
gaacgctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
gtttgtctgggctcccacatcaacaaaaaggcaagacagaagctgctagctgctattgac
gacatagacaggcctaaaagataa
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