Grus americana (Whooping crane): 129202889
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Entry
129202889 CDS
T11359
Name
(RefSeq) sodium channel protein type 5 subunit alpha-like isoform X1
KO
K04838
voltage-gated sodium channel type V alpha
Organism
game Grus americana (Whooping crane)
Pathway
game04261
Adrenergic signaling in cardiomyocytes
game04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129202889
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129202889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
game04040
]
129202889
Ion channels [BR:
game04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129202889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Na_trans_cytopl
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
129202889
NCBI-ProteinID:
XP_054672472
LinkDB
All DBs
Position
2:complement(162651812..162868556)
Genome browser
AA seq
1898 aa
AA seq
DB search
MADFLLPPGTNSFHRFTPESLAAIEKRIAEKLARNAKQEYREQLGEEEKPQPQFDLQACK
KLPDIYGTVPPELIGEPLEDLDPFYNDRKTFIVLNKGKTIFRFSATPALYILSPFHPIRR
AAIKILVHSLFSMFIMCTILTNCVFMAQSETPSWNKYVEYTFTGIYTFESLIKILARGFC
MTEFTFLRDPWNWLDFSVIVMAYITEFVDLGNVSALRTFRVLRALKTISVISGLKTIVGA
LIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRHKCVRDYTKFNSTNGTLYLDGRMWN
TSEEFLSDPVNYFIKNGTEDVLLCGNSTDAGTCPEGYICLKAGENPDHGYTSFDTFGWAF
LSLFRLMTQDYWERLYQQTLRSAGKIYMLFFMLVIFLGSFYLVNLILAVVAMAYEEQNQA
TIAETEEKERKFREAMEMLKKEQEALAAKGIDSMSLSSLEMSPLASKNAKERRNRRKKKK
SLGAEEYGEDQRNPKCDYDDGQRRMQTSPSDEASKKQLLMPHRPSVDHSDEPFQRQRAVS
AVSIITSALEELEESHQKCPPCWNHFAVKFLIWDCCPLWLLIKKFVKFVVMDPFTDLTIT
LCIVLNTLFMALEHYKMTKEFDHMLYIGNLVFTGIFTAEMIFKVIALDPYYYFQQGWNIF
DSIIVILSLMELGLSSMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTL
VLAIIVFIFAVVGMQLFGKSYLDNVKKISTTGNLPRWHMNDFFHSFLIIFRILCGEWIET
MWDCMEVAGQPLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLSAPDEDGEMNNLQLA
FARINRGLQYVKHTTWDFCCNVLRHPKTTAEKKAMMKLAAQNTGALNNCVNSHTTTELGK
DMENHKDNHAEDGMNKNGEKHLGITDNDDFMTNPDLSICVPIAVGESDIEEEDEEQSTFT
EMEQQEKQLQLRGQRCQSPGVRSQNSEICEELSELHADKQLKAEPPPPVGQKELDEISLS
EGSTVDLTNPAELLEQIPEFAEELMEPEDCFPEVCVRFFPCCSVDITKFPGKIWWRLRKT
CYRIVEHNWFETFIIFMILLSSGALAFEDIYLEDRKNIKTMLEYADKIFTYIFVLEMLLK
WVAYGFKKYFTNAWCWLDFLIVDVSLISLIANTLGYSEMGPIKSLRTLRALRPLRALSRF
EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCINKTEGDMPLDSKI
INNMSDCILYNVSGTFYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRECEEQ
PEWECNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNKYQGFIFDVVSKQAFDVSIMILICLNMVTMMVETDDQSQEKV
NILHKINMLFVAIFTGECIIKMLALRHYYFTNGWNIFDFVVVILSIVGTVLSDIIQKYFF
SPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMA
NFAYVKKEHGIDDMFNFQTFANSMLCLFQITTSAGWDGLLNPILNTGPPYCDPNLPNANG
SKGDCGSPAVGILFFVTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEI
WEKFDPEATQFIEYSALSDFADALSEPLRIAKPNKIKLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKQEEVSAIIIQRAYRRHLF
RRSMKQASYLYRHRTFDGSILEDDAPEKEGLIAFMMNENYGRPIDKSETLSSTSFPPSYD
SVTRGTSDNLQLKMTDSSKSDEAIDCLLSPDKDKESIV
NT seq
5697 nt
NT seq
+upstream
nt +downstream
nt
atggctgacttcttgttaccaccgggtactaacagcttccaccggttcacgcctgaatcc
ttggctgctattgagaaacgaattgcggagaagcttgcaaggaatgcaaagcaggaatac
agagagcagctgggcgaagaagaaaaacctcagcctcagtttgatttgcaagcttgcaag
aagctgcctgatatctatgggactgttcctccagagctcattggagagccgttggaggac
cttgaccctttctacaatgatcgtaagacatttatagtactgaacaaagggaagacaatc
tttcgatttagtgccactcctgccttgtatatacttagtcctttccatccaatcagaaga
gcagcaattaaaattttggtacattcattgttcagtatgtttattatgtgcactatttta
actaattgtgtgttcatggcacaatcagagactccgtcatggaataaatatgttgagtac
actttcactggcatttacacttttgagtcattgataaaaatattggcaagaggattttgc
atgacagagttcaccttccttcgagatccatggaactggctggacttcagtgttatcgtt
atggcatacataactgaatttgtggacctgggcaatgtctcagccttacgaacgttcaga
gtactgcgggcgctgaaaacaatctcagtcatttcaggactgaagaccattgtaggggca
cttatccagtctgttaagaaacttgctgatgtgatgatcctgaccgttttctgcttgagt
gtctttgccctcataggcctccagctcttcatgggcaacttgcgacacaagtgtgtcagg
gactacaccaagtttaactccaccaatggcacgttgtacttggatggtaggatgtggaac
acctcagaggaatttcttagtgatccagtgaactatttcataaaaaacggtacagaagat
gtgttactgtgcggcaatagcactgatgctggcacatgccctgaaggatatatatgtctg
aaggctggggaaaatcctgaccatggttacacaagctttgatacttttggctgggccttt
ctctctttgttccgtcttatgactcaagattattgggaacgtctttatcaacagactctc
agatctgctgggaagatctacatgcttttttttatgctggtcatctttctgggctcattt
tatctggtcaacctgattctggctgttgtggccatggcgtatgaagagcagaaccaagcc
actattgctgaaacagaagagaaggaaagaaagtttcgggaagccatggagatgttaaag
aaagagcaggaggcactagctgctaaaggaattgattcaatgtcacttagttcattggaa
atgtcacctttagcatccaaaaatgccaaggaaagaagaaataggcgaaagaaaaagaaa
tctttgggggcagaagagtatggggaagaccaaaggaatcccaagtgtgactacgatgac
ggtcagaggagaatgcagacctctccctcggatgaggcaagcaagaagcagcttttaatg
ccccaccgcccgtcggtggaccactcggacgaaccctttcagaggcagagggcagtgagc
gctgtcagcatcatcaccagtgccctggaagagcttgaggaatcacaccagaaatgtcct
ccctgctggaaccactttgctgttaaatttctcatttgggattgctgcccgctttggctt
ttaatcaagaaatttgtcaagtttgtggtaatggacccatttaccgacctcaccatcacc
ctttgcattgtgctgaacacgctcttcatggccttggagcattacaagatgacaaaggag
tttgaccacatgctttacataggcaatttggtcttcactgggatttttacagcagaaatg
atcttcaaagtaattgcccttgacccctactactattttcagcagggctggaatattttt
gacagcataattgttatactaagcctgatggaactgggtttgtccagcatgggaaacctg
tctgttttacgctcctttcgattgctgcgagtcttcaaattggcaaaatcctggccgacc
ttaaatacactcattaaaatcattggcaattcagtgggtgccctcggtaacctcactctt
gtgctggcaatcatcgtctttatttttgccgtggtaggaatgcagctttttgggaaaagc
tacctggacaacgtgaagaagataagcacaactggcaatttgccacggtggcacatgaac
gatttcttccactccttccttatcatcttccgaattttatgtggagagtggatcgagacc
atgtgggactgcatggaagtagctgggcagccgctgtgccttcttgtcttcttgttggtc
atggtgataggaaacctagtggtgctcaacctgttccttgccttgctgctaagctccttc
agcgctgacaacctctcagcaccagatgaggatggggagatgaacaatctgcagctcgct
tttgctcggatcaacaggggtcttcagtatgtgaaacacacaacatgggatttttgctgc
aatgtcctccggcaccccaagacaacagctgaaaagaaggcaatgatgaagcttgctgcc
cagaatacaggtgcccttaacaattgtgtgaacagtcacacaaccactgagcttggcaaa
gacatggagaatcacaaagacaaccacgctgaggatgggatgaataaaaatggggagaaa
cacctaggaattacagacaatgatgattttatgaccaatcctgacctgtccatttgtgtt
cctattgctgtgggagagtcagatatcgaggaggaagatgaggagcagagcacctttaca
gaaatggagcagcaggaaaaacagctgcagctgagggggcagcgatgccaaagcccaggc
gtccggagtcagaactctgagatttgtgaagagttaagtgagttgcacgcggataagcag
ttgaaggctgagccaccacctccagtagggcaaaaagagcttgatgaaatcagtctttcc
gaaggcagcacagtggatttgacaaatcctgcagaactgctggagcagatccctgagttt
gctgaggagctgatggagcctgaagattgcttccccgaagtttgtgtgcgattcttccca
tgctgttcagtggacatcacaaaatttccaggcaaaatttggtggaggctgcggaaaacc
tgctacagaattgtcgaacacaactggtttgaaactttcatcatattcatgatcctgctg
agcagtggagccctggcttttgaagatatttaccttgaagatcgaaaaaacataaaaacc
atgctggagtacgctgacaaaatattcacttacatctttgtcttggaaatgctcctgaaa
tgggtggcttatggcttcaagaagtatttcaccaatgcctggtgctggcttgacttccta
attgtagatgtctctttaataagcctcatagccaatacacttggatactccgagatgggt
cccattaaatccctcaggaccctccgagccctgcgaccattaagagcattgtcgcgattc
gaagggatgagggtggtggtcaacgcccttgtgggagccatcccttccatcatgaacgtt
ctgctcgtctgcctcatcttctggcttatctttagcatcatgggagtgaacctgtttgct
gggaaatttgggaagtgcattaataagacagaaggagatatgcctttagactctaaaatt
attaacaacatgagtgactgtatactctacaatgtgtcaggcacgttctactggacaaaa
gttaaagttaacttcgataatgttggtgctgggtacctggctctgctacaagtggccaca
tttaaaggttggatggatattatgtatgcagcagtggattcacgagagtgtgaggagcag
cctgaatgggaatgtaatttatacatgtacctgtactttgtgattttcatcatcttcggg
tctttcttcacactgaacctcttcattggtgtcatcattgacaatttcaaccaacaaaag
aaaaagttaggtggccaagacatctttatgacagaagaacagaaaaagtattataatgca
atgaaaaagctgggatctaagaaacctcagaagccaatcccaaggccactgaacaaatac
caaggttttatttttgatgtcgtttcaaaacaagcctttgatgtctccatcatgattctc
atctgccttaacatggttaccatgatggtggaaacagatgaccaaagccaagaaaaagtg
aacatactccataaaatcaacatgctttttgttgccatcttcactggagagtgcatcatc
aaaatgctggctctgagacattattacttcaccaatggttggaacatatttgactttgtc
gtcgtgattctgtctattgtaggcaccgtactttctgacatcatccagaaatatttcttc
tctcccacactcttcagagtcattcgcttggctcggattggccggatcttaagactcatc
cggggagccaaaggaattcgaactctgctttttgccttaatgatgtccctacctgctctg
ttcaacattggtctcctgctttttctggtcatgttcatttatgccatttttggcatggct
aactttgcctatgttaagaaggagcatgggattgatgacatgttcaacttccaaaccttt
gctaacagcatgctctgtctctttcaaatcacaacgtcagctggctgggatggtcttctc
aaccctattttaaacaccggaccaccgtattgcgacccaaaccttccgaatgcaaatggt
tccaagggagactgcggaagccctgccgtagggattttattctttgttacttatatcatt
atatcatttctcattgttgtaaacatgtatatagccattattttagagaacttcagtgta
gccactgaggaaagtacagagcctctaagcgaggatgattttgatatgttctatgaaatc
tgggagaagtttgaccctgaagccactcagtttattgagtattctgcactttcagacttt
gcagacgcgctgtcagaacctttgcgcatagcgaaaccaaacaaaatcaaactcatagca
atggacctgcccatggtcagtggagataggatccattgcttagatattttgtttgctttt
acaaaaagggtgctaggagaatctggagagatggatgcccttaaaatacagatggaagaa
aagttcatggcggcaaatccgtctaagatctcttatgagccgattacaacaactctcagg
cggaaacaagaagaggtctctgccatcatcatccagcgggcctacaggagacatttgttt
cggcgctccatgaagcaggcatcctacttgtaccggcacagaacttttgacggcagcatc
ctcgaggatgatgcacccgagaaggagggtcttattgcgttcatgatgaacgaaaactac
ggcaggccaatagacaaatcagaaactctgtcctccacatctttccctccatcctacgac
agcgtcaccagaggtacgagtgataatctccagctgaagatgacagactcgagcaaaagc
gatgaggctatagattgtcttctctcaccggacaaggataaagaatcaattgtttaa
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integrated database retrieval system
