Grus americana (Whooping crane): 129202907
Help
Entry
129202907 CDS
T11359
Name
(RefSeq) transcription factor SOX-17-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
game Grus americana (Whooping crane)
Pathway
game04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129202907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
game03000
]
129202907
Transcription factors [BR:
game03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129202907
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
129202907
NCBI-ProteinID:
XP_054672518
LinkDB
All DBs
Position
2:complement(43367974..43370084)
Genome browser
AA seq
402 aa
AA seq
DB search
MSSPDAGYASSDDQAQGRCSLPTMMPAMGSCPWAESLSPLGEGKAKGEAAPSGAASGRSK
SEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAER
LRVQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAAGSGLGSEVGGGGGRMCVEA
LGLPYAEQGYAAAAAAGAGHYRDCPPLGAGFDGYSLPTPDPSPLDAAESEAPFFAAGLQE
ECALVPYGDAPHPAAEYPPSAAESPAGAALRRHLPPGETLGPGGSLQGLLGCPAPLHAYY
GQACQPPGPGRGPPGAVGQPSPPPEAAPCREQLEHLPQEELLGEVDRTEFEQYLRFACKP
ELGLPFAGHDAAGLPAPEGAGPISSAVSDASTAVYYCGYPDV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggcgcaggggcggtgctcg
ctgcctaccatgatgccggccatgggctcctgcccgtgggcagagtcgctgagcccgctg
ggcgaggggaaagcgaagggcgaggcggcgccgtcgggggcggcgagcggccggagcaag
agcgaggcgcggatccggcggcccatgaacgccttcatggtgtgggcgaaggacgagcgc
aagcggctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggt
aaatcgtggaaggcgctgtcgctggcggagaagcgtccgttcgtggaggaggcggagcgg
ctgcgggtgcagcacatgcaggaccaccccaactacaagtaccggccgcggcggcggaag
caggtgaagcgcctgaagcgggtggagagcggcttcctgcagcacggcctggcggaggcg
gcggggtccgggctgggcagcgaggtcggcggcggcggtggcaggatgtgcgtggaggcc
ctaggcctgccctacgccgagcagggctacgcggcggcggcggcggcgggcgcgggccac
taccgggactgtccgccgctgggcgccgggttcgacggctacagcctgccgacgccggac
ccgtcgccgctggacgcggcggagagcgaggcgccgttcttcgcggcggggctgcaggag
gagtgcgcgctggtgccctacggcgacgccccgcacccggcggccgagtacccgccgtcg
gcggccgagagcccggcgggcgccgcgctgcgccggcacctgccgcccggcgagacgctg
gggccgggcggctcgctgcaggggctgctgggctgcccggcgccgctgcacgcctactac
gggcaggcctgccagccgccgggcccggggcgcggcccgccgggggcggtcgggcagccg
tcgccgccgcccgaggcggctccgtgccgggagcagctggagcacttgccgcaggaggag
ctgctgggcgaggtggaccgcaccgagttcgagcagtacctgcgcttcgcctgcaagccc
gagctggggctgcccttcgcgggccacgacgccgccgggctgccggcgcccgagggcgcg
gggcccatctcttcggccgtgtcggacgccagcaccgccgtctactactgcggctacccc
gacgtgtga
DBGET
integrated database retrieval system