Grus americana (Whooping crane): 129204626
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Entry
129204626 CDS
T11359
Symbol
SLC8A1
Name
(RefSeq) sodium/calcium exchanger 1 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
game Grus americana (Whooping crane)
Pathway
game04020
Calcium signaling pathway
game04260
Cardiac muscle contraction
game04261
Adrenergic signaling in cardiomyocytes
game04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
game00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129204626 (SLC8A1)
04020 Calcium signaling pathway
129204626 (SLC8A1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129204626 (SLC8A1)
04261 Adrenergic signaling in cardiomyocytes
129204626 (SLC8A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
game02000
]
129204626 (SLC8A1)
00536 Glycosaminoglycan binding proteins [BR:
game00536
]
129204626 (SLC8A1)
Transporters [BR:
game02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
129204626 (SLC8A1)
Glycosaminoglycan binding proteins [BR:
game00536
]
Heparan sulfate / Heparin
Others
129204626 (SLC8A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
129204626
NCBI-ProteinID:
XP_054676852
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All DBs
Position
3:complement(113487792..113625816)
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AA seq
1000 aa
AA seq
DB search
MRAFFHSTLPTTAETRLGLWMFGTCLVEAAMSRGTRRPTFPVSFQLLSVVLVLLFHADGI
HAESPSELPVNNTEECTGSYICKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVS
IIADRFMSSIEVITSQEREITIKKPNGETSKTTVRIWNETVSNLTLMALGSSAPEILLSV
IEVCGHGFTAGDLGPSTIVGSAAFNMFVIIAICVYVVPDGEIRKIKHLRVFFVTAAWSIF
AYTWLYIILSVSSPGIVEVWEGLLTFFFFPICVVFAWIADRRLLFYKYVYKKYRAGKQRG
MIIEHEGDRPSSKADIEMDGKVANSHVENFLDGTLVLEVDEKDQDDEEARREMARILKEL
KQKHPDKEIEQLIELANYQVLSQQQKSRAFYRIQATRLMTGAGNILKRHAADQARKAVSM
HEVNSEVAENDPISKLYFEQGTYQCLENCGTVALTIIRRGGDLTNTVYVDFRTEDGTANA
GSDYEFTEGTVVFKPGETQKEIRVGIIDDDIFEEDENFLVHLSNVRVSTEASDEGILEAS
RVSTLACLGSPSTATVTIFDDDHAGIFTFEEPVTHVSESVGTMEVKVLRTSGARGNVIVP
YKTIEGSAKGGGEDFEDTCGELEFQNDEIVKTISIKVIDDEEYEKNKTFYLEIGEPRLVE
MSEKKALLLNELGGFTITGKLWKGKPVFRKVQARDHPLPCTVVTIQEENEEKQPLTSKEE
EERRIAEMGRPVLGEHSKLEVIIEESYEFKNTVDKLIKKTNLALVVGTNSWREQFIEAIT
VSAGEDDDDDECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTDYWNGWACFVVSILMIGL
LTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGS
NAVNVFLGIGVAWSIAAIYHAAHGQAFQVSPGTLAFSVTLFTIFAFISVGVLLYRRRPEI
GGELGGPRTSKLLTSSLFILLWLLYIFFSSLEAYCHIKGF
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagggcttttttccattctactttacccacaactgctgagactcggctggggttgtgg
atgtttgggacctgtttggtggaagcggccatgtcacgaggaactcgccgacccaccttc
ccagtgagcttccaactcctgagtgttgtgctggtgttgctcttccatgcagatggcata
catgcggagagccccagcgaattgcctgtgaacaacaccgaggagtgcactggctcatac
atctgcaaaaagggtgtgattttaccaatatgggaaccccaagacccctcattcggtgac
aaaattgctcgggcaacagtgtattttgtagcgatggtgtacatgttcctgggggtatct
atcatagctgaccgcttcatgtcctccatcgaagtcattacatcccaagaacgggaaata
accatcaagaagcccaatggtgagacaagcaaaaccacagtgaggatctggaatgagaca
gtttccaacctcacactgatggccttgggctcgtctgcccctgagatcctcttgtctgtt
atcgaagtgtgtggccatggcttcacagcaggggacttggggccaagcacaattgtgggg
agtgctgcatttaacatgtttgtcatcattgcgatctgtgtttacgttgttccagatgga
gagataagaaagatcaagcacttgcgagtgttttttgttacagctgcctggagcatcttt
gcctacacttggctttacattattttatctgtgtcttctcctgggattgtggaggtttgg
gaaggcttgctcaccttcttctttttccccatctgtgtggtgtttgcctggatagctgac
aggaggcttttattttacaagtatgtctacaagaaataccgtgctggcaagcagagaggc
atgatcattgagcatgagggtgaccggccctcctccaaagctgatattgagatggacgga
aaggttgctaattctcatgtggagaattttttggatgggacactggtgttggaggtggat
gagaaagaccaggatgatgaggaagccaggagggaaatggctcggatcctgaaggagctg
aaacaaaagcaccccgacaaagaaattgaacagcttatagagttggccaactaccaggtc
ctgagccagcagcagaagagcagagcattttaccgcattcaggccactcggctcatgacg
ggagctggcaacatcttgaagagacatgctgcagaccaggcccgcaaagctgtcagcatg
cacgaggtcaacagtgaggtggcagaaaatgatcccatcagcaagctctactttgagcag
ggtacctaccagtgtctggagaactgtggcactgtcgccctaaccatcattcgccgggga
ggtgacttgaccaacacggtgtacgttgacttccggacagaggatgggacagccaatgca
ggctctgactatgagttcactgaagggacagtggtcttcaagcctggagaaacccagaag
gaaatccgtgttggcataatcgacgatgacatatttgaggaggatgagaatttcctggtc
catctcagcaatgtccgtgtgagcactgaggcctcagatgagggcattcttgaggccagt
cgtgtctcaacacttgcctgcctaggatcaccatctactgccactgtcaccatttttgac
gatgaccacgctggcatcttcacctttgaggagccagtaacacatgtcagtgaaagtgtg
gggaccatggaagttaaagtgttgcgaacctctggtgcacgaggaaatgttattgtgccc
tacaaaaccattgaaggctcagccaaaggtggaggagaagactttgaagacacctgtggg
gagctggagttccagaacgatgagatagtcaaaacgatatcaatcaaggtgatagatgat
gaggagtatgagaaaaacaagaccttctacctagagatcggggagccccggctggtggag
atgagtgagaagaaagccctgttgttgaatgagcttggtggcttcaccatcacagggaaa
ctctggaagggcaaacctgtcttcaggaaggtccaggctagagatcatcctcttccttgc
accgtggtcaccatccaagaggagaatgaagaaaagcagccactgaccagcaaggaggag
gaagagcgtcgaattgcagagatggggcgcccagtcctaggggaacacagcaagcttgaa
gtcatcattgaggaatcctatgagttcaagaacacggtggacaagctcattaagaagacg
aacttggccctggtggttggcacaaacagctggagggagcagtttattgaggctattact
gtcagcgcaggggaagatgacgatgatgatgaatgtggggaggagaagctgccctcctgc
ttcgactacgttatgcactttctgactgtcttctggaaggtcctttttgccttcgtgccc
ccaacagactactggaatggctgggcttgtttcgtcgtctccatcctcatgatcggcctc
ctgacagcttttattggcgacctggcatcccacttcggctgcaccatcggcttgaaggac
tcagtcaccgcggtcgtgtttgttgcactggggacatcagtgccagacacatttgccagc
aaagtagcagcgacgcaggaccagtacgcagatgcctccatcgggaatgtcaccgggagc
aatgccgtgaatgttttcctgggcattggcgtggcctggtccatcgcggccatttaccac
gcggcgcatggacaagccttccaagtctcgcccggcaccctggccttctccgtcaccctc
ttcaccatttttgcttttatcagtgtgggcgtgctgctctaccggcggagacccgagatt
ggaggtgagctgggcgggccgcggacttccaagctgctcacatcctcactctttatcctc
ctctggctcttgtacatattcttctcatctctggaagcctactgccacataaagggcttc
taa
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