Grus americana (Whooping crane): 129204637
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Entry
129204637 CDS
T11359
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
game Grus americana (Whooping crane)
Pathway
game04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
game00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129204637 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
game04121
]
129204637 (TRIM54)
Ubiquitin system [BR:
game04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129204637 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
TRIM_CC
Sina_RING
RHH_9
Prok-RING_4
CYP38_PsbQ-like
Zn_ribbon_FGT1_2
CoiA_N
CagA
Motif
Other DBs
NCBI-GeneID:
129204637
NCBI-ProteinID:
XP_054676894
LinkDB
All DBs
Position
3:complement(350856..354136)
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AA seq
380 aa
AA seq
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MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKSELSDGIAM
LVAGNDRIQAIISQMEEICRTIEENGRRQKQHLGLRFDSLYSILEERKKELLQSIAREQE
VKVQRVRGLIRQYGDHLEASSKLVESAIQAMEEPQMAVYLQHSKELLKKITDMSKVSMSS
RPEPGYENMDHFSINVDYVAEMLRTIEFQTEPLGEDEADGPGDGSEATADEDRLDSLEAP
EAMEDVGPRQKPASSPHGQH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccgctgctggcggaggcgcggagcatggagagcctg
gagaaacagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgtcttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgcggtgccgtcgggcggccggttccggtgcccgtcg
tgccgccacgaggtggtgctggaccggcacggggtgtacgggctgcagcggaacctgctg
gtggagaacatcatcgacatctacaagcaggagtcggccaggcccctgcacgccaaggcc
gagcagcacctcatgtgcgaggagcacgaggatgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtctttggggcgcacaaggactgcgaggtt
gcgccgctgcccgccgtctaccagcgccagaagagcgagctcagcgacggcatcgccatg
ctggtggcagggaacgaccgcatccaggccatcatctcccagatggaggagatctgccgc
accattgaggagaacggccggcggcagaagcagcacctggggctgcgcttcgactcgctg
tacagcatcctggaggagcggaagaaggagctgctgcagagcatcgcgcgggagcaggag
gtgaaagtgcagcgcgtgcggggcctcatccgccagtatggcgaccacctggaggcctcc
tccaagctggtggagtcggccatccaggccatggaggaaccccagatggccgtgtacctg
cagcactccaaggagctcctgaaaaagatcacagacatgtccaaggtgtcgatgagcagc
cgcccggagcctggctacgagaacatggaccacttctccatcaatgtggactatgtggcg
gagatgctgaggaccatcgagttccagacagagccgctgggtgaggacgaggcggatgga
cctggggacggcagcgaggccacagcagatgaggaccggctggacagcctggaggcacct
gaagccatggaggatgtggggccgaggcagaagccggcaagttctccccatggtcagcac
tga
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integrated database retrieval system
