Grus americana (Whooping crane): 129204647
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Entry
129204647 CDS
T11359
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
game Grus americana (Whooping crane)
Pathway
game03008
Ribosome biogenesis in eukaryotes
game03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129204647 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
129204647 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129204647 (XRN2)
03019 Messenger RNA biogenesis [BR:
game03019
]
129204647 (XRN2)
03009 Ribosome biogenesis [BR:
game03009
]
129204647 (XRN2)
03016 Transfer RNA biogenesis [BR:
game03016
]
129204647 (XRN2)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129204647 (XRN2)
Messenger RNA biogenesis [BR:
game03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
129204647 (XRN2)
Ribosome biogenesis [BR:
game03009
]
Eukaryotic type
Pre-60S particles
RNases
129204647 (XRN2)
Transfer RNA biogenesis [BR:
game03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
129204647 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
129204647
NCBI-ProteinID:
XP_054676967
LinkDB
All DBs
Position
3:complement(125549376..125598457)
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGIKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPFAEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSL
TSDGSPSLAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEPVDMPPELCHGIQG
KLTLNENAVLPDQTVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPV
LKPGDWEKTNNDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLG
TYGSPYTRPLLSGQQQIPKLLSNLRPQESWRGPTPLFQQTPQRTAGAAPLLAWNRMLQSQ
NQYQPSQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagccgcaagtacccctccatcatcgtcaac
tgcgtggaggagaaggctaaggagtgcaatggcatcaaggctccaattgatacaagcaaa
ccaaaccctaatgaggtggagtttgataacctgtatttggatatgaatggtataattcac
ccttgtacacatccagaggacaagccagcacccaaaaatgaagatgaaatgatggttgcg
atttttgagtatattgacaggatcttcaacattgtgagaccaaggcgacttctttacatg
gctatagacggagtagctccacgtgcaaaaatgaatcaacagcggtcaagaagattcaga
gcatcaaaggagggcatggaagctgctgaagagaagcaaaaaatcagacaagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagagatttgacagcaactgtatt
accccgggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttgaacagcgacccagggtggaaaaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataaaatcatggattacattagaagacaaagagctcaaccaaac
catgacccaaacacccatcactgtctgtgtggggctgatgctgatctgattatgcttggt
ttagctacgcatgaaccaaacttcactataattagggaagagtttaaaccaaataaaccc
aagccatgtgctctttgtaaccagatgggtcatgaggttaaggattgccaaggtttgccc
agagaaaagcaaggcaagcacgatcagtttgccgacagccttcctttcgctgaacaagaa
ttcatcttcatccgattatgtgttttgcgggagtatttggaaagagagctcactatggcc
agtttgcctttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaacgtggtgcacaaaaccgggggatacctcacagaa
agtggttttgtcaacctacagcgggtccagatgatcatgttagctgttggagaagttgaa
gacagtattttcaaaaagagaaaagatgacgatgataactttaaaagacggcaaaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggccagttttcccct
caagctctgggaaatcgatctagtcctcaggcaatcagtaaccctagacaagccgccttt
gagatgagaatgcacgacagacagaattctacaacttcatcatctccaaataccagcctg
acttctgatggcagcccatccctggcaggaggaattaagcgaaaagctgaagatagtgac
agtgaacctgagccagaggataatatcaggttatgggaaactggttggaaacagcgctac
tataaaaacaaatttgatgttgatgcatctgatgagaaatttcgtcgtaaagttgtacag
tcctatgtggaagggctctgctgggttctcagatactattaccagggctgtgcatcctgg
aactggtactacccttttcactatgctccgtttgcctcagactttgagggtatcgcagac
atgccttcagattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatggga
gtatttccagctgcaagtggaaattttctgccaccaacgtggaggaagctcatgacagat
ccggaatcaagcataattgacttctaccctgaagattttgctattgatttaaatgggaag
aagtacgcttggcaaggtgttgcattattgccatttgtggatgagcgacgccttagagct
gccctggaagaagtctaccctgacctcactcctgaagaaagcagaagaaacagccttggt
ggggatgttctctttgttggaaagcaccatccgctttgtgactttattgtagaacagtac
aagaccaaaaatacagagccagtggatatgcccccagagctgtgccatggaatccaggga
aagctgactctgaatgaaaatgccgttcttccagatcagacagtggagtctcctgttcca
atgctgcgtgatcttgcacaaaactctgcagtcagtatctctttcaaagatccacaattt
gatgaagactttgttttcaaggctatagtgttacctggtgcaaagaaacctgctccagtt
ctgaagccaggagactgggaaaaaaccaacaatgatggcaggccgtggagaccacagctg
ggttttaaccgagacagaaaaccagtccatttggaccagtcagcatttagaactttgggc
cacacgatgccgagggaaagagggatgccaggaatgtatgccaacgcagtacctctggga
acttacgggagcccatacaccaggccgcttctgagtgggcagcagcagattcctaaactg
ttgtcaaatcttagaccacaggaatcgtggcgaggtcctacgcccttgtttcagcagacg
ccgcagagaactgctggggctgctcctcttctcgcctggaaccgcatgctgcaatcccaa
aatcagtaccagccaagtcagtaccaggggctgggcggaccaatgagttacccacagaga
cctgaagatcggatggacaggggaagacaggcatacggccccgggaggccctacccgctg
ccaccgccctcaggaagatacagctggaattag
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