Grus americana (Whooping crane): 129204841
Help
Entry
129204841 CDS
T11359
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
game03021
]
129204841 (SCAF8)
03041 Spliceosome [BR:
game03041
]
129204841 (SCAF8)
Transcription machinery [BR:
game03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129204841 (SCAF8)
Spliceosome [BR:
game03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129204841 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129204841
NCBI-ProteinID:
XP_054677509
LinkDB
All DBs
Position
3:complement(69094024..69261619)
Genome browser
AA seq
1357 aa
AA seq
DB search
MEAVKAFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWV
SQIANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAAAAANTLNPLEQSVSFNKKLMDRFDFGEESEQNEEPKKETPTSQLPLVPESVNNSL
FHQLAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVE
PNVDDSMDIQQQDMDIDEGQDVAEEEIFEQEEKKSAVRSRSRTRSRSRSRSPRKRRSRSR
SGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKI
GSKIIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLEGFAEGGMIDQETVNTEW
ETARSSEAAKESIQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAFP
VTMSVPPPGYSAIPPPPFLRASFNPTQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPLV
QPPLPIAQETMKDVPFTSLVLPVGTVTSNLATPTLSAGSIFNPLPINKPESDEKGSHLAD
LQISSSENSRSVQNDVSSSSGLVGGVQPPSVSSSSGLPGEGQPPSVSSSSGLAGGVQPPS
VSSSSGLIGGVQPPTVSSSSGLAGGIQLPTVSSSSPLAGGVQPASVSSSSGLMAGVQPPN
VSSSSGLLAGVHPPSVSSSPGLLTGMQPPNVSSSSGVLAGVQPPSVSSNSGLLIMPPPNV
SSSSGLMGVPPPNISSSSGLLAMQHPAGVQNMPHLNISSQRMPGMPLIDIRPGLVPHSPG
PRFPLMQPGMPPQRSIPPPAILDPSLHPPPRGPFPPADIFNQTERPFGTPGRQNIDSISN
PEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPREGIGRPPVD
GREHFARPHVDMRENFGRPGIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPIYGGPKS
FHEDRERFRHVNYRFDSRSGPNWNRGFEQDSHRDFDDRRRPWERQRDRDDRDFNFCREIN
GNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTAQVQDDP
ELYEKLTSSIEINKEKSDTEADIESEPVVESTETEGT
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaagcctttaacagcgagttgtactcgctaaatgattataagccaccc
atttctaaagctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttctac
aagcatgttgtacagagcgttgagaaattcattcaaaagtgcaaaccagaatataaggta
cctggtctgtatgtcattgactccattgtgagacagtcccggcatcagtttggacaagag
aaggatgtatttgctccaagatttagcaataacatcatcagcactttccagaacttgtac
cgttgtcctggggatgataagagtaaaattgttagagtgctaaatttatggcagaagaat
aacgtgttcaagagtgaaattattcagcctctcttggatatggcagcaggaattcctcct
ccagttgtgacccctgtcttgcccagtactacagctgctatgagcaacaatacaccagga
acacctgtgactccagttactccagccaatgtggtgcagagtttacctgatccttgggta
tctcagattgctaatacagatacccttgctgctgttgcacagattttacaaagtcctcaa
ggccaacagcttcagcagttgatacagacactgcagatacagcagcagaaacctcagcct
tcactacttcaagccctggatgctggtctagttgttcagttacaggccctcacagcacaa
cttacagctgcagctgctgctgctaacacacttaatccactggaacagagtgtctctttt
aataagaagctgatggacaggtttgactttggggaagaatctgaacaaaatgaagagcct
aaaaaggaaactcccacatcccaactgcctttagtaccagagtctgtgaacaactcactt
tttcaccaactagctgaacagctacagcaacaaaatttagaacatctcagacaacagctt
ctggagcaacagcagcctcaaaaggcaagccctgaggagaatcaagaaggaaattttggt
tcagagcactctgcatcaccatcacaagggagcagtcaacagcagtttttagaagtggaa
ccaaatgtagatgattcaatggatattcaacaacaggatatggatatagatgaaggacag
gatgttgctgaagaagagatttttgaacaagaagaaaagaaatcagctgttcgttcaaga
tcaagaactcgatcaagatctcgttcaaggtcaccaagaaaacgacggtctagatcacgg
tctggttctcgtaagcgtaaacacagaaaacgttcacgctcaagatcaagagaaaggaag
agaaagtcgtctcggtcatactccagtgaaagaagggctagggagagggaaaaagaacgt
cagaaaaagggattgcctcctatacggtcaaaaacactaagtgtttgcagtactactctt
tgggtgggtcaagtagacaagaaggctacacagcaagatttaactaacttgtttgaagaa
tttggacaaatagagtcaattaatatgattcccccaagaggttgtgcttatgtctgtatg
gtacatagacaagatgcgtatcgtgctcttcagaaacttagttctgggtcctataaaatt
ggatctaaaattattaagattgcctgggctttgaataaaggtgtgaaaacagaatacaag
cagttctgggatgtggatctgggagtttcatatattccttgggagaaagtaaaattggat
gatttggagggctttgctgaaggtggcatgattgaccaggaaacagtaaatacagaatgg
gaaacagcccgaagctcagaagctgctaaagaaagtattcaaactacgcagagcgctgca
gttgataagagtacagttattacaacgcagacagaagcttacacgcaaccagtcactatg
ctgcagattccagtagctccagctgtgcctgctgttagcttggttccacctgcgtttcct
gtcacaatgtctgtccctcctcctggttatagcgcaattcctcctccacccttcttgcga
gcaagtttcaaccctacgcagccacctccaggttatatgcctcccccagttccacctgtg
gtcccaccacctgtggtcccaccacctgttgtcccaccagttgttccaacacctttagta
cagcctccattaccaattgcacaagagacgatgaaggatgttccttttactagccttgtt
ctaccagttggcacagttactagcaatctagctactccaacattatctgctggaagcatt
tttaatcctctgccaatcaacaaaccagaatcagatgagaagggatcacatcttgcagac
cttcagatttcttccagtgaaaacagtagatctgtgcaaaatgatgtctcgagtagctct
ggacttgttggaggagtgcagccacctagcgtctcaagcagttctgggcttcctggagaa
gggcaaccacccagtgtctcaagtagctctggacttgcagggggagtacagccacctagt
gtttcaagcagctctggacttataggaggagtgcaaccaccaactgtttcaagcagttct
ggtcttgcaggaggaatacagctacctactgtctccagtagctctcctcttgctggcgga
gttcagccagccagcgtctcaagtagctctggacttatggctggagtgcaaccaccaaat
gtctcaagtagctcagggcttctagctggagtgcatccacccagtgtctcaagcagccct
ggccttctgacaggaatgcagccacccaatgtctcaagcagctcaggagttctggcagga
gtacagccaccgagtgtctcaagcaactctgggcttctcataatgccaccacccaatgtt
tcaagtagttctggacttatgggagtgccaccaccaaatatttcaagtagttctggactt
ctggcaatgcagcacccagctggggttcaaaacatgcctcatttaaatattagtagtcaa
aggatgcccggaatgcctctaatagatatccgtccaggcctagtgccccattcgcctgga
ccaaggtttccattaatgcagccaggaatgccaccgcagcgtagtattcctcctccagca
atccttgatccatctcttcacccaccacctcgaggtccttttcctccagcagatattttt
aatcaaacagaaagaccttttggaaccccaggaagacaaaatatcgatagcatttctaat
ccagagaaaagactgccacttggaggcgataacattcagcaggaaggagacagagattat
cgctttcctccagtggaaaaccgagataaccttaacagaccatctccagtggatgtcaga
gattctgttggacggccaccggttgatccaagagagggtataggaaggcctccagtagat
ggaagagaacactttgcaagaccacatgtagacatgagagaaaactttggaagaccaggt
atagacaaccttggtcgaagagagcattttggttttaattcagacaagcactgggggcag
agaggagattatgatgaaagggagcaccacgccttccctatttatggtggccctaaaagc
ttccatgaagacagagagaggtttcggcatgtaaactataggtttgatagtagaagtggt
cccaattggaatagaggatttgaacaagattctcacagagattttgatgaccgcagaaga
ccctgggaaagacagagggatagggatgacagagattttaatttttgcagagaaattaat
gggaacaggtttggaagagacagaatgtcaaacaactggatcccccctccacatccacgg
gtttttgaatattttgacggggccacttctcaacgcaaagccgataatatgccccaggta
aacggtgaaaatacagagacagaaagtcagccaccaactgcacaggtgcaggatgatcca
gaactttatgaaaaactgacatcttccatcgagataaacaaagagaagagtgacacagaa
gctgatatagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
