Grus americana (Whooping crane): 129205037
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Entry
129205037 CDS
T11359
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
game03041
]
129205037 (DDX1)
03016 Transfer RNA biogenesis [BR:
game03016
]
129205037 (DDX1)
Enzymes [BR:
game01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129205037 (DDX1)
Spliceosome [BR:
game03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129205037 (DDX1)
Transfer RNA biogenesis [BR:
game03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129205037 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
129205037
NCBI-ProteinID:
XP_054677978
LinkDB
All DBs
Position
3:complement(13874256..13896221)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTTGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttctacctacagatatccaagcagaatctatcccactgatcctgggaggtggt
gatgtacttatggctgctgaaacaggaagtggaaaaactggtgctttcagcattccagtt
atccagattgtttatgaaacactgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaactggtggggcagtgctcaataaatggcaaatgaacccatatgatagaggatca
gcttttgcaattggatcagacggtttgtgttgtcaaagcagagaagtaaaggaatggcat
ggatgcagagcaactagaggtgtgactaaagggaagtactactatgaagtttcttgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatttgggtact
gataaatttggctttggctttggtggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaactgggtgttatctagacatagataaa
ggacaaataaaattttccaaaaacgggaaggacctcggccttgcatttgaaatcccacca
cacatcaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagaagatttcaagtttccaccaaaagatggctatattggtctttgtaag
gctcctgatggtagtgttgtaaaatcacaacactcaggaaatgcacaagtggttcaaaca
cagaaccttccaaatgctccaaaagcattgattgtagaaccttcaagagagctggcagaa
caaactttgaacaatgtcaagcagttcaaaaaatatgtcgataatcccaaattaagggaa
ctgttgattattggtggggttgctgcaagagatcaactctctatactggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctggtctcaacaggaaagcttaat
ttatctcaagtgagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacttcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcctacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatccaaaagctgacaaactctgggaaaggctcggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaacacacgacctggtgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacaccgttcgggca
atcaaagaacacaagatggaccaagccattattttctgcaggactaaaatagattgtgat
aatatggagcagtactttattcaacagggtggagggcctgataggaagggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaacgtcacactccctgatgaaaaacagaactatgtc
catcgaattgggagagtgggcagagctgagaggatgggattggcaatctcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaaggatgttataat
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtacca
gtagatgattttgatgggaaagttacatatgggcagaaaagagctctgggtggtggactg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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