Grus americana (Whooping crane): 129205580
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Entry
129205580 CDS
T11359
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
game Grus americana (Whooping crane)
Pathway
game03030
DNA replication
game03410
Base excision repair
game03420
Nucleotide excision repair
game03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
game00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129205580 (RFC1)
03410 Base excision repair
129205580 (RFC1)
03420 Nucleotide excision repair
129205580 (RFC1)
03430 Mismatch repair
129205580 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
game03032
]
129205580 (RFC1)
03400 DNA repair and recombination proteins [BR:
game03400
]
129205580 (RFC1)
DNA replication proteins [BR:
game03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129205580 (RFC1)
DNA repair and recombination proteins [BR:
game03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129205580 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
AAA_14
PTCB-BRCT
Rad17
AAA_22
BRCT_2
AAA_30
AAA_5
AAA_16
RuvB_N
AAA_18
AAA_17
RNA_helicase
AAA_33
AAA_7
nSTAND3
Pr_beta_C
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
129205580
NCBI-ProteinID:
XP_054679248
LinkDB
All DBs
Position
4:complement(25534001..25579761)
Genome browser
AA seq
1154 aa
AA seq
DB search
MDIRKFFGVVPSGKRQECETVKKSEKIKNGEGPSSGKKKGKETKVNNSPSEDDSKQKRTN
KKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQDPVVYISETDEEDDFVNKRI
SLKPKENGTSVIGCPGTTAVKKEDVKPRPKSKPLSPVKQTPTSALDYFGTSSVQRSEKKL
VASKRKEPSQSRDSTLDDEAIARQLQLEEDTELERQLHEDEEFAKTLAMLDETPQKKKAR
RDSGGEQTVLSIKSSPNVTERCKQSERATNSTGETKNYTAKQQTKSEHSKGSRLSSQPSD
GKIARELMDNTLPLKPSSKLVSLKQKEEIAEKERGAQSLVSKEKTASRKEEKTTPKKEKI
SPKKTESISPEDSEKKRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGLTFVITGVLE
CIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKREKASTLGTKIIDEDGLFDLI
RTMPGKKSKYELAAETEAKKVESRPKRTPQKAEAGKRNFSPFKRDADNKKQKSTPEKGHI
ITSVKKETTAARKLLDFKRQTVEKKEAPKSNGISVSEINDGETERLLWVDKYKPASLKAI
IGQQGEQSCANKLLRWLRNWHKNASEDGQAKTNKTGGKDDGTGFKAALLSGPPGVGKTTT
ASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSSSVSGKHVLIMDE
VDGMAGNEDRGGIQELIGLIRHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRLEQIK
GAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLTYDEAKTDASRAK
KDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVKPAAAGGNL
KKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELMRGYMSQFPVFPS
WLGKFSSTGKHDRIIQELAMHMSLRTQMCKRTVNMEYLSYLRDALVQPLKDFGADGVQEA
ITFMDSYCLMKEDIENIMEISTWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLNFVK
TSKRQSGSAVTLELNEDLNVEEIQSDEDERDTVENDAMIKQKKAKSSKLPKREKSEETTK
KEGKRKEKTRHQTE
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggtgttgtaccttctggaaagcgacaggaatgtgagact
gtgaaaaagagtgaaaaaattaaaaatggtgaaggaccttcaagtgggaagaaaaaggga
aaggagactaaggtgaataattcacccagtgaagatgattccaaacaaaagcggacgaac
aagaaaaaaagaataatctatgattcagattcagaagaggaggtgcagtcagtgaaaaaa
tccaagaagccatctgagaaaaaagcagctacttcaaaacttggtaaagttctaaagcag
gatcctgttgtttatatttcagagacagatgaagaagacgactttgtcaataaaagaatt
tccctgaaaccgaaggagaatgggacatcagtgattggttgtccaggaacaactgcagtg
aaaaaggaagatgtaaaaccacgacctaaaagcaagccattatctccagtgaaacagact
cccacatcagcacttgattactttgggacaagtagtgtccaacgatcagaaaagaagctg
gtagcaagtaaaaggaaagaaccttcacaaagcagagacagcacactagatgatgaggcc
attgctaggcaactgcagcttgaagaagatacggagctggagagacagctgcatgaagat
gaagaatttgctaaaactttggccatgttggatgaaacaccacagaagaaaaaggctcgg
agagattcaggaggagagcaaacagtattgagcatcaagagcagtcctaacgtgacagaa
aggtgtaagcagtcggaaagagcaacgaactcaacaggtgaaacaaagaattacactgcg
aagcagcaaactaaatctgaacattcaaaagggtctcgtttatcctcgcaaccatctgat
ggtaaaatcgcaagagagttgatggataacaccttgcctttgaaacctagctctaagctt
gtgtctctgaagcaaaaagaagagattgctgaaaaggaaagaggtgctcaaagcttagta
tcaaaagaaaaaactgcttcaaggaaagaggagaagacaacaccaaagaaggagaaaatt
tctcccaagaagactgagtccataagtcctgaggactccgagaagaagcgaatcaattat
caagcctaccgaagcttccttaatcgcgagggtccaaaagcgctgggttccaaagagata
cctcaaggggctgaaaactgcttggaaggcctgacattcgtaattacaggcgttttggag
tgtattgaaagagatgaggccaagtctctgattgaacgttacggaggaaaagtaactggc
aatgtcagcaagaagacaaactatctggttatggggcgagactgtggccaatcaaaacgt
gaaaaggcatcaactttagggactaaaattattgatgaggatggcctgtttgatcttatt
cgaactatgccaggcaaaaagtccaagtatgagctggcagctgaaacagaggcgaagaaa
gtggagtcaagacctaaaaggacaccacagaaagctgaagctggaaaaaggaattttagc
cccttcaaaagggacgctgataataaaaaacagaagtctactcctgaaaaaggacatatc
atcacatctgttaagaaagaaaccactgctgctcgaaagcttctggattttaaacggcaa
actgtagaaaagaaagaagccccaaaatctaacgggatctctgtttctgagattaacgac
ggcgaaacagagagattgctatgggtagataaatacaaacctgcatctcttaaggcaata
attggacagcaaggtgaacaaagctgtgccaataaactgctccgatggctccgaaattgg
cacaagaacgcttcagaagatggacaagcaaagaccaataaaactggaggcaaagatgat
ggtactggttttaaagcagcattactttctggtccacctggagttggtaaaactactaca
gcttctttggtttgtaaggaactggggtatagctatgtggagctgaatgccagtgacact
cgcagtaagaacagtctaaaggaagtagttgctgaatcgctcaataacaccagcatcaaa
gacttctgttccggcacatcctcatcagttagcgggaaacatgtattgatcatggatgaa
gtggatggtatggcaggcaatgaagacagaggagggattcaggaattgattggtttgatt
agacacacaaagatacccatcatctgtatgtgtaatgatcgcaaccatcctaaaattcgt
tccttggtccactactgttttgatcttcgttttcagagacctcgtctagaacagattaag
ggtgccatgatgtctattgcatttaaagaaggtttaaaaatcccaccacctgctatgcaa
gagataatcctggcagcaaatcaggacatcagacaggttttacataatcttaatatgtgg
tgtgcaaaagataaatcgttgacttatgatgaggctaaaacagatgccagcagagccaaa
aaggatatcaaactgggcccttttgatgttgtccggaaggtttttgctactggagaggag
gcttctcgtatgtctcttatagacaaatcagatcttttcttccatgattattccctagca
cctctctttgtccaagagaactacgtacatgtgaaaccagctgctgctggaggaaatctg
aaaaagcacttagtgctcttgagtagagcagctgatagtatatgtgatggtgatatagtg
gacaaacagattcgtagcaagcaaaactggaatcttcttccaacacaggccatttatgca
agtgttctcccaggggagctgatgagaggttacatgtcccagtttcctgtctttcccagc
tggctggggaaattttcatccacaggcaaacacgatcgtatcattcaagaactggcaatg
cacatgagcctcagaacccagatgtgcaagaggacagtaaatatggagtatctgtcatat
ttgcgggatgcgcttgtccagcccttgaaagacttcggagcagatggtgtacaagaagct
ataacgttcatggactcttactgcttgatgaaagaagatattgaaaatatcatggaaata
agcacgtggggaggcaaacccagtcctttttcaaagctggatcccaaggtcaaagcagct
tttacacgtgcctacaacaaagaggcacatctgactccatattcacttaattttgtcaag
acatctaaaaggcagtcgggatctgcggtgaccttagaactgaatgaagacttgaatgtg
gaagagatccaatccgatgaggatgagcgagatactgttgaaaatgatgcaatgattaag
caaaaaaaggcgaagtcttccaagctgccaaaaagagagaaaagtgaagaaacaacaaaa
aaagaagggaagagaaaagagaaaacaagacatcaaacagaataa
DBGET
integrated database retrieval system
