Grus americana (Whooping crane): 129206042
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Entry
129206042 CDS
T11359
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
game00536
]
129206042 (COL25A1)
Glycosaminoglycan binding proteins [BR:
game00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129206042 (COL25A1)
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GFIT
Other DBs
NCBI-GeneID:
129206042
NCBI-ProteinID:
XP_054680632
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Position
4:complement(57364003..57678929)
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AA seq
672 aa
AA seq
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MGGGGKEIKAAAAEGCKSTLGKSRGAAGRDGSGKPGCGGDRCPRRAGPCGSALAALLSAL
AAASCVYLGVRTSDLQARVAAIEGARGGFSAAAPLPPLPGYSLEQLNAMMQEKVERLLAQ
KSYEHLAKIRVAREVPPECNCPPGPPGKRGKRGRRGETGPPGQPGPQGPPGPKGEKGDQG
DQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGI
PGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQVGEPGLPGIAGEKGAAGLKGDPGE
RGEKGDAGENGPKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEP
GFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGVPGPKGKTGEPGSRGPKGSKGDTG
DRGDTGSAGPRGPPGQKGDQGATEIINYNGNIHEALQGPPGPPGPQGLQGPKGEAGSPGT
PGVDGEQGPKGSKGDTGDPGMPGEKGGIGLPGLPGANGMKGEKGDVGLPGAQGPSVIGPP
GPPGPHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEPGQKGDRGPLGLPGASGLDGKPGPR
GVDGPVGPHGPAGPKGDRGEKGTVGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDIGEK
GEKVTAVLLTIA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagctgccgcagctgaagggtgtaaaagcacgtta
gggaagagccgaggagccgcaggacgggatggcagcgggaagcccggctgcggcggggac
cgctgcccgcggcgggccgggccgtgcggctctgcgctggcggctctcctctcggcgctg
gcggcggcctcctgcgtctacctgggggtgcggaccagcgacctccaggccagggtcgcg
gccatcgagggcgcccgagggggcttctctgccgccgccccgctcccgccgctgcccggc
tattccctggagcagctgaacgcgatgatgcaggagaaagtggagcgacttctcgcccag
aaatcgtacgaacacttggcaaaaatccgagtagcgagagaagtgcctccagagtgcaac
tgcccaccaggtcctccagggaaaagaggtaagcggggcagaagaggagagactggacct
cctggtcagcctggtcctcaaggccctcccggtccaaaaggcgagaagggagatcaaggt
gatcagggccctcggggtctgccaggcttccccacagtcgctgctctgcacagtaatcag
atcctcaccgtcaagggggaccaaggacaagctggaccccctgggcctccagggccacca
ggacccagaggtcccccaggagataccggcaaagatggtcctcgcgggatgcctggcata
ccgggtgagccaggtaaaccaggagaacaaggattgacaggacctcaggggcctccagga
caaaagggttctgtcggagtgcctggtgttccagggagagatggacaagtgggtgaacct
ggtttgcctggcatagcaggagagaagggagcagcagggcttaagggtgaccctggagaa
agaggagaaaagggtgatgctggagaaaatggaccaaagggtgacacaggagaaaagggt
gaccctggttcttctgctgcaggaattaagggtgaacctggtgaatctggacggcctgga
caaaagggtgaaccaggtcttcctgggcttcctggactccctgggataaagggtgaacca
ggtttcattggtccgcaaggagaacctgggttgccagggctaccaggaacgaagggtgac
agaggagaggcaggccctgttgggaagggtgagcgaggtgaacctggagttcctggacca
aaggggaaaacaggtgaacctggatctagaggcccaaaagggtcaaagggtgatacaggt
gacagaggtgacacaggatctgcaggtccacggggaccacctggacagaagggtgatcaa
ggtgcaacagagataattaattataatggcaatatccatgaagctctgcaggggccacca
ggaccaccgggaccccaagggctgcaagggccaaagggtgaagcaggatccccaggaact
ccaggagttgatggggagcagggtcctaaaggctcaaaaggagatacaggtgatcctgga
atgcctggagaaaagggaggaattggactgcctggcctgccgggagccaatggtatgaaa
ggcgaaaaaggagatgttggtttgccaggtgcccaaggtccttcagtgataggaccacct
ggaccaccagggccacatggtcctccaggccctatgggacctcatggactgcctggccca
aagggtgaaccagggttaaatggtcttaaaggattgaagggtgaaccgggtcaaaagggt
gacagagggccccttggtcttccaggagcatctggcttagacggaaagccaggaccccgg
ggtgtagatggtccagttggtccccatggccctgcaggtcctaaaggagacagaggtgaa
aagggaaccgtaggtgaccccggacccagaggaccatacggcttgcctggcaaagatggc
gagcctggccttgatggattccctggtcctcgaggagaaaagggtgatataggagaaaag
ggagaaaaggtgaccgcagtgttattaaccattgcttga
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