Grus americana (Whooping crane): 129206155
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Entry
129206155 CDS
T11359
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
game Grus americana (Whooping crane)
Brite
KEGG Orthology (KO) [BR:
game00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
game04131
]
129206155 (SH3TC1)
Membrane trafficking [BR:
game04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
129206155 (SH3TC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
ARM_TT21_C
ARM_TT21_4th
TPR_10
SH3_1
RMD1-3
SH3_2
Motif
Other DBs
NCBI-GeneID:
129206155
NCBI-ProteinID:
XP_054680887
LinkDB
All DBs
Position
4:complement(12032492..12064371)
Genome browser
AA seq
1331 aa
AA seq
DB search
MESSAEAGSASVPSANATTPSPEGKRDRNLETKDMEQGRCRSGWKCAEANAAISAVRDGV
RTNMLQEQMECSQSEKCTNVSSRTLRSQPENFPTDIFLKLTMVRRKSGCPDPRLQRQLRG
QLRLLENDSREVMAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFQTYHSLGFINHCME
NLFLDESFWLYPQEEEEAGIEVCINEKSLHLMYRSLLVQEGAFFVLCPDNLIRKIMATDN
EINTYFETGAFTKDGGSVDGDKTVLSNASPEPLIPFHQWFLKGYSNPVDFAHKTESKSIG
KVAMGSCLAVMNYESIVLEEISFQEGDKIEILGYFIECMEWFLGRHVFTGQIGFVKTSHV
KLDLSRNKPQDLDFLEAEELSFFSKEKNLEEVVHLLKETSITDVCSVYRIDQLEEPEFQK
AHECEIPHSHSRTGSISKNGKIEEFLKNFKNLEVTQAEEPTIEGKDSASSPNTEIFLPPE
GPCFHIHQDDVPASDILDSLLLFLNRKDYEKNFRNLYDFSYPFINSMFYGFSEEEELVSF
FRLAREAAKKAGMSWALARLCFLLGRLSVKKLKFSQARVYFEEALGAVAGGFSDLYFVIA
LYTNLTVIYLTQKNKEKCAHVFDKATSLLMGIPNYICSADLESDILKYALKRTILSQNKH
AEARACFLLAKHYSARKQHEEALPFLERFQLLLNDLGLQNNLSNNCYFKLAESYNEKCLP
HIVLSCIKVTSSQSSSTLMDSLKRIDLVIKNAPKLCGLRKLRQILPSQIAPYLIQALSSV
FTNEQQGLCSIIYLSLAKLYSHHKRYGKAIVYMMKALDANVSAKPEETINCLVSLAWLYI
LYRQYDVALAILNAVVDSSWSSPQQLGIAYNMLAIALKRTNNTKEAAESYYKALRLSEQT
NVTHNQAIALANFGALCLHAAASKLAEHYYIRAVKLFSKLPSMDCGLDFIQVLLQLGCYY
VGGTQREKGRFYYEWAFLVAMETSHLESQLQAIKLLCQFYSTVVPNEAQCVIYNEYQLSL
ARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKEAYAWLRA
GKIYYVLRQNELVDLYIQVAQDAALYTGDPNLGMELFEAAGDIFFNGTWEKEKALTFYRD
RALPLAVKTGNKTTELRLCNKLVELLVNLKIYEESLEYARASLILSVSLGNRLNERIAYH
RLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYLILGDIIFYDLKDPFDA
AGYYQLALAAAMDLGNKKAQLKIYTRLAIIYHNFLVDREMSLFFYQKARTFATELNVRRI
NLAPDQCYKSS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcagcagaggcaggcagcgcatccgtgcccagtgctaacgccaccacccct
agtccagagggaaagcgagacaggaacttggagacgaaagatatggagcagggaaggtgc
aggtctggctggaaatgtgcagaggccaatgctgccatcagcgctgtcagggatggagtc
aggacgaacatgttgcaagaacaaatggagtgttctcaaagtgaaaaatgcacaaatgtc
agttcaaggacccttcgcagtcaaccagagaattttccaactgatatcttcttgaagtta
acgatggtaagacgaaagagtggatgtcctgatcccagactccaaagacagctgagaggg
cagctccgtcttctggaaaacgacagcagggaggtgatggcagttttcagtgagctctct
gccagactgctgtctattcacagtgatcaagatctaatagtggtgacatttaaaactttt
gaggaaatatggaagtttcagacctaccactcactgggttttataaatcattgcatggag
aatttatttctagatgaatctttctggctctatcctcaagaggaggaagaagcaggcatt
gaagtctgtataaatgaaaaatcattacatttgatgtacagaagcctgctagtacaggaa
ggggcattttttgttttatgtcctgacaatctgataagaaagataatggctacagacaat
gaaataaacacttattttgagactggggcttttactaaagatggtggatctgtggatggt
gacaagacagtgctgtctaatgcttctccagagccgttgatcccttttcatcagtggttt
cttaaagggtattctaatcctgttgattttgcacacaaaactgaatctaaatccatcggt
aaagttgcaatgggatcctgtctagctgtgatgaattatgaaagtattgtgctggaagag
attagtttccaggaaggggacaaaattgagatccttggctacttcattgaatgcatggaa
tggtttcttggaagacatgtgtttactggccaaataggttttgtaaagacaagtcatgtt
aaactggacttatctagaaataagccacaagacctggattttcttgaagcagaagagcta
tcttttttctcaaaagaaaaaaatttggaagaagtggtacatttgttgaaagaaacctcc
atcacagatgtttgttctgtgtatagaatagaccaattagaagaaccagaatttcagaaa
gctcatgaatgtgaaattccacattcacattctcgcacaggatccattagcaagaatggc
aagatagaggaattcctgaagaatttcaagaatttggaggtcactcaggcagaagagcca
actattgaaggaaaggattctgctagctctccaaatacagaaatctttcttccacctgaa
ggaccttgctttcacatacatcaagatgatgttccagcatctgacatccttgactcattg
ttactcttcttaaataggaaggactatgagaaaaacttcagaaacctgtatgatttctct
tatccatttatcaatagcatgttttatgggttttcagaagaagaagaactggttagcttt
tttagattagcaagggaagcagcaaagaaagcaggtatgtcctgggcactagcaaggctg
tgctttctcttaggcaggctcagtgttaaaaagctgaagttttcccaagctcgggtgtat
tttgaggaagcgttgggagcagtagctggagggtttagtgatttgtactttgtaattgct
ctttatacaaatctcacagtcatctacttgacacagaagaacaaagaaaaatgtgctcat
gtttttgacaaggctacatctcttctcatgggaattcccaactacatttgcagtgctgac
ctggagtcagatattctaaagtatgctctgaagaggacaattttaagccagaacaaacat
gcagaggcaagggcatgctttctactggcaaaacattacagtgcgcgcaaacagcatgag
gaggcactaccgttcttggaaaggtttcaactgttacttaatgacttgggtttacaaaac
aacttatctaacaactgttatttcaaactagcagagtcctacaatgaaaagtgtttgcca
cacattgtattgagctgcataaaggtcacctcttcccagagctccagtactttaatggat
tccttgaaaaggattgatttagtcatcaaaaatgctcccaagctctgtggcctgagaaaa
ctcaggcaaatactcccatcccaaattgcaccttacctcatacaagcactttcctctgtg
tttactaatgagcagcaaggactatgcagtattatctatcttagcttagcaaaactgtac
agccaccacaaacggtacggaaaagccattgtttacatgatgaaagcactggatgctaat
gtttctgccaagccagaggaaactattaactgtttggtttcacttgcttggttatacatt
ctttacaggcaatatgatgtggctttagccattttaaatgctgttgtagactcttcatgg
agcagtcctcaacaactaggcatcgcttataatatgcttgctattgccttgaaaagaaca
aacaatacaaaagaagctgctgagagctactacaaagcactgcgtctttcagaacagacc
aatgtgacccacaaccaagctatagccctggctaactttggggcactctgcctgcatgca
gcagccagcaagctggcagaacattattacatcagggcagtgaagctattctccaaactt
ccaagtatggactgtggcctagactttatccaagtcctccttcagctaggatgttactat
gttggtggaactcaaagagaaaaaggaaggttttattatgaatgggcttttttagttgca
atggagacaagtcatctggaaagtcaactacaagcaattaaactgctgtgtcagttctac
agtacagttgttcccaatgaggctcagtgtgtcatctacaatgaatatcaactatcttta
gctagaaagatgtccaacaaagttctggagggacaaattttggaaaccattagtcagctc
tatttgtctttaggaacagaaagggcttacagatcagcgctggaatacaccaaaagaagc
cttgggatatttatagatctccagaaaaaagagaaagaggcctatgcttggctacgtgca
ggaaagatatattatgttctgaggcagaatgagcttgtggatctttatattcaggttgct
caggatgctgctctttacacgggagatccaaatttaggaatggaattatttgaagctgcc
ggagacatatttttcaatggtacttgggaaaaggagaaagcattgactttctacagggac
agggctcttccacttgctgttaagactggcaacaaaaccactgaactcagattatgcaat
aaactggtggaattactggtgaatctgaagatttatgaggaaagtctggaatacgcaaga
gcatctcttatactcagtgtaagtttaggaaatcggctaaatgaacgaatagcttaccat
cggctggctgccatccatcatcatttgggtcactgtgaactagctgaacacttttattta
aaggccttgtccctctgttcctctcctctggagtttgaggaggaaacgctgtattacgtc
aaggtgtacttgatcttaggagacattatattctatgaccttaaggatccctttgatgca
gcaggctattatcaattagcacttgctgctgccatggacctgggcaataaaaaagctcaa
ctgaagatttacacaagacttgcaatcatctaccataacttccttgtggatcgggaaatg
tctctcttcttctatcaaaaagcaaggacctttgcaacagagctgaatgttaggagaata
aatctagctcctgatcagtgttacaagagttcataa
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